Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1729 |
Symbol | |
ID | 7258698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1857036 |
End bp | 1857668 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643561631 |
Product | Methionine synthase |
Protein accession | YP_002458211 |
Protein GI | 219667776 |
COG category | [R] General function prediction only |
COG ID | [COG5012] Predicted cobalamin binding protein |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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Plasmid Coverage information |
Num covering plasmid clones | 83 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATT TAACGAAGTT AGCGGATACC GTTTTCCGGG GGGATTTTGG CAATGCCGGG CAAATCACCA GGGAGCTTAT CGATAGTGGG GTAGAGCCTT TAACCATCAT CAATCAGGGG CTGATCGCCG GTATGGATAT CGTGGCCCCT AAGTTTAAAG CCGGAGAAAT GTTTGTGCCG GAGGTTATGA TGGCGGCCAG AGCCATGGCC GTGGGCATGG AGGTGGTTAA GCCCTTGATT CAGGATGCGG ATATTCCTTC CAAAGGAACG GTCCTCATCG GCACGGTGGC CGGGGATCTC CACGATATTG GCAAAAACCT GGTGATCATG ATTCTGGAAA GCGGTGGCTT TAAGGTTGTG GATTTGGGTG TGGATGTCTC GGTGGAAAAA TTCGTGGCAG CGGCCAAGCA ATATAATCCT CAGGTCATCG GTATGTCCGC TTTGTTGACG ACGACCATGA CGGCGATGAA GGATACTATT GATGCCCTGA CGGAAGCCGG TCTGCGGCAG AGCTTAAAGG TTATCGTGGG CGGAGCGCCT TTATCCCAGG AATTTGCCAG CCAGATCGGC GCGGATGGTT ATGCGGCGGA TGCCATGGCC GCCAAGGAAC TGTGCGAAAA ACTGGCAGGA TAA
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Protein sequence | MSDLTKLADT VFRGDFGNAG QITRELIDSG VEPLTIINQG LIAGMDIVAP KFKAGEMFVP EVMMAARAMA VGMEVVKPLI QDADIPSKGT VLIGTVAGDL HDIGKNLVIM ILESGGFKVV DLGVDVSVEK FVAAAKQYNP QVIGMSALLT TTMTAMKDTI DALTEAGLRQ SLKVIVGGAP LSQEFASQIG ADGYAADAMA AKELCEKLAG
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