Gene Dhaf_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1729 
Symbol 
ID7258698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1857036 
End bp1857668 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content53% 
IMG OID643561631 
ProductMethionine synthase 
Protein accessionYP_002458211 
Protein GI219667776 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family 


Plasmid Coverage information

Num covering plasmid clones83 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATT TAACGAAGTT AGCGGATACC GTTTTCCGGG GGGATTTTGG CAATGCCGGG 
CAAATCACCA GGGAGCTTAT CGATAGTGGG GTAGAGCCTT TAACCATCAT CAATCAGGGG
CTGATCGCCG GTATGGATAT CGTGGCCCCT AAGTTTAAAG CCGGAGAAAT GTTTGTGCCG
GAGGTTATGA TGGCGGCCAG AGCCATGGCC GTGGGCATGG AGGTGGTTAA GCCCTTGATT
CAGGATGCGG ATATTCCTTC CAAAGGAACG GTCCTCATCG GCACGGTGGC CGGGGATCTC
CACGATATTG GCAAAAACCT GGTGATCATG ATTCTGGAAA GCGGTGGCTT TAAGGTTGTG
GATTTGGGTG TGGATGTCTC GGTGGAAAAA TTCGTGGCAG CGGCCAAGCA ATATAATCCT
CAGGTCATCG GTATGTCCGC TTTGTTGACG ACGACCATGA CGGCGATGAA GGATACTATT
GATGCCCTGA CGGAAGCCGG TCTGCGGCAG AGCTTAAAGG TTATCGTGGG CGGAGCGCCT
TTATCCCAGG AATTTGCCAG CCAGATCGGC GCGGATGGTT ATGCGGCGGA TGCCATGGCC
GCCAAGGAAC TGTGCGAAAA ACTGGCAGGA TAA
 
Protein sequence
MSDLTKLADT VFRGDFGNAG QITRELIDSG VEPLTIINQG LIAGMDIVAP KFKAGEMFVP 
EVMMAARAMA VGMEVVKPLI QDADIPSKGT VLIGTVAGDL HDIGKNLVIM ILESGGFKVV
DLGVDVSVEK FVAAAKQYNP QVIGMSALLT TTMTAMKDTI DALTEAGLRQ SLKVIVGGAP
LSQEFASQIG ADGYAADAMA AKELCEKLAG