Gene Dhaf_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1696 
Symbol 
ID7258665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1808506 
End bp1809621 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content46% 
IMG OID643561598 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002458178 
Protein GI219667743 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.324356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTTTG GCAGTCACTT AAGACAACTA AGAGAGAATC ATATGCTTTC AACCTCCAGG 
TTATCTAAGC TATCCGGCTT AAGCCAATCC TTTATCTTCA GGATCGAGTC TGGAGAAAAA
CAACCGACCC TGGAAACCCT GCGCAAGTTG GCCCAAGGGT TGGGCATCAG CCTGGGAGAG
CTGCTCGGTG AGGAAATGCT GAGCGAGCCT CAATCACCAA AAATCAGCCG GATTATCGGT
AATATACGAA AACTCCCCGT TGAGCAGGTG GATGCCCTTG ATTTATTTTT GGCTTCCCTT
TCTTCCAGTT ACGCCGTGGG GGAAAACCCG CTGACAGTAC AGGCCATTAA TCTCAAAAAT
TCTGCCGGGG ACGGCTTTGA AATGGAGGTA GTCTTTTCTT CCAATGTCTC GGCTATTATG
GAGCATAGAA TCCCTGACGG CACAAACCGA AATATGGCAG GATTCCATCT CTATGACGGT
GAGATGAAGG AGATTCCGAT TGAAATTATT TCGGGAAGCA AGAAAATGCT GGGGCAAAGG
GCGGAAAGAA TCTTCGTGAT CAAACCCAAA ATCCGGCTTA CGGACGGAAG ATTTTATAAG
CTAACCATAT CTAAGCTGCT GCAGGCTAAT AATTATAAGT ACTTGAAAGA AAACCACACC
ATATTGTTTA CGACACGGGA GATTGTCGAT ATCACTCCAT ATAATAAGAA GCTATGCAGC
CCTTATCTTT CCTTGGCCCT GGAGAAAAGC AATATCAATT CCGGTGACGA AAATATCCCG
GTTAATACCG AAATCAGACT GACTTTTTCC AATAATGTGA TTACGAAAGC AGTGCGCGAT
AATAACCTGC ATTGCTTTTC TTTGCGCAGC AGCAAAAACC AGATTGTAGA GATCGATGTC
ATCATGGGGG ACCCCGATGA TAATTCCGAT AAGAAAAAGG AGATTGTGAT CCGTCCCCAA
CAGCACCTAC TGGCAAATAC TCTTTATATC CTGACCATTT CCGAAAACCT GCAGGGGGGC
AATCAGAAGC TGCTGGGAAG GGATAAAGCG ATTATCTTCA CTACCGATGA GACCGGCGCC
GCTACTGCCG GACAGGGCGG GGTAGGGATT GCCTAG
 
Protein sequence
MDFGSHLRQL RENHMLSTSR LSKLSGLSQS FIFRIESGEK QPTLETLRKL AQGLGISLGE 
LLGEEMLSEP QSPKISRIIG NIRKLPVEQV DALDLFLASL SSSYAVGENP LTVQAINLKN
SAGDGFEMEV VFSSNVSAIM EHRIPDGTNR NMAGFHLYDG EMKEIPIEII SGSKKMLGQR
AERIFVIKPK IRLTDGRFYK LTISKLLQAN NYKYLKENHT ILFTTREIVD ITPYNKKLCS
PYLSLALEKS NINSGDENIP VNTEIRLTFS NNVITKAVRD NNLHCFSLRS SKNQIVEIDV
IMGDPDDNSD KKKEIVIRPQ QHLLANTLYI LTISENLQGG NQKLLGRDKA IIFTTDETGA
ATAGQGGVGI A