| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1668 |
|---|
| Symbol | |
|---|
| ID | 7258637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1783812 |
|---|
| End bp | 1784696 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643561570 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002458150 |
|---|
| Protein GI | 219667715 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 74 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGGGTA ACCACCGGAT CAGAAATCTG ATCCATTTTG CAATTTTGCT GGTACTGGCT
GTCCTGCTGA TGTTTCCCCT GGCTGTAACC GTCACCAATT CCTTGATGAG TGAACAGGAA
ATCGCCGCTC ATTATAACCC GGTGACGGAC AAAAATTTAA GCAGCTATCA GGAGGACAGC
GGGGATCACT TTGCCCGGTT CCAGCTGATC CCCGAGGTGG TGGTGCTGAA GCAGTATTAT
AACGTACTCA TCAAAAAGAC CCAGTTTCTG TTCATGTTCT GGAATTCTGT GCTGCTCACC
TTCCCCATTG TCATCGGGCA AACGATGGTG GCAACCCTGG CGGCCTATGC CTTTGCCAAA
CTGAAGTTCA GGGGCAGGAA TTTCCTGTTT TTTTTGTATA TCATCGTGAT GCTGATGCCC
TTCCAGGTCA CGCTTGTGCC CAATTATTTA ATGGCCGGCC AGCTGGGCCT GCTTAACAGC
CATTGGTCCA TTATCCTGCC CGGCATCTTC AGCACTTTTG GCGTATTTCT CTTAAAACAG
TATATGGAGC AAATACCGGA CTCCTATCTT GAAGCGGCCC GGGTGGACGG AGCCAGCCAG
TTCCAGATTT TTCTCAAAAT CATTCTGCCC ATGTCCAGGG GCGGTATAGC AGCCATGGCC
ATCCTTGTGT TTATCGATAA CTGGAACATG GTGGAGCAGC CCTTGATTTT TTTACAGGAT
GCGGCCAAAC AGCCTCTTTC CCTCTATCTT TCCAGAATCA TCGACGGTGA AAAAGGATTG
GCCTTTGCCG CGTCCGTTTT ATATATGCTG CCGGCGCTGC TGAACTTCCT TTATGCCGAA
AAATACTTGC TGGAAGGAAT CCGGCTCTCC GGAATCAAAG GCTGA
|
|---|
| Protein sequence | MKGNHRIRNL IHFAILLVLA VLLMFPLAVT VTNSLMSEQE IAAHYNPVTD KNLSSYQEDS
GDHFARFQLI PEVVVLKQYY NVLIKKTQFL FMFWNSVLLT FPIVIGQTMV ATLAAYAFAK
LKFRGRNFLF FLYIIVMLMP FQVTLVPNYL MAGQLGLLNS HWSIILPGIF STFGVFLLKQ
YMEQIPDSYL EAARVDGASQ FQIFLKIILP MSRGGIAAMA ILVFIDNWNM VEQPLIFLQD
AAKQPLSLYL SRIIDGEKGL AFAASVLYML PALLNFLYAE KYLLEGIRLS GIKG
|
|---|
| |