| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1613 |
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| Symbol | |
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| ID | 7258582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1720920 |
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| End bp | 1722704 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643561517 |
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| Product | histidine kinase |
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| Protein accession | YP_002458097 |
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| Protein GI | 219667662 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000260533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTTTC ATCAGCAATT AACCTTGCTT TTTGCGATCT TTTCATTAGG GTTGGTTATC
TGTGGGTATA GGGTGCAAGA TGTGGGAATC GCCGGTGTAT TTTCTTTGCC TATACAGGTA
AGGGCTGTTT TGGCCGTAGA ATCTGTGCTT GACATTGCCC AAAAGAATAA AATGCTGCCT
GCGGTGTCTA TTGCAGGCAT GGGTATTTTT TTAGGTATAT CCAGGTATCG TTTCTTGCCA
TGGCTGCCCC TGGCAAGAGC GGCAGCCATC GATGCGATTC AGGAAGGGAT GATCATCGTC
GACGAACAGG GCGGAGTCGT TGATCATAAT GTTGCCGTAG ACAGGTTTAT CTACGACATT
ATCGGGGTGA AGCGCAATGT CATCGGCAAG AATATTGAGT CGGTGCTCTC TGCCTGGCCC
CAATGGCAAT CGGCCTGTAA GAATGGGCAT GAAGATGAGT TTGAGATCGA TGTTTCAGCT
TGGGGAAAGG CCAGATTCTT CCGGGTAAAA GTGTATCCTC TTCAAGAATA TAATTTCCGG
AAAAGGGGAA CGGTTTCGGT GCTTACGGAT ATTACGGAGG ACAGAATCCG GGGACAGAAG
ACCTCGGATT CAGAATGCAG CGGAGAGCTG GTTCAAAAAG AGTTAACCCT GCTGAAACGG
CAAATGGAGA TGGTTTTCAG CACCATATCG GACCGGGCGT TGTTATCCAT TGTGGATCGC
AACGGTAATT ACTTGTTTTA TACCGAGGCC GTCAAAACCC AATTTGTCGA AGCTGCCGCC
GATCTTACGA TTGGCTCGGC CTTCCGCAAA GGATTGTATT TTTATGCCGG CGGAACAGAA
ATGGACTATT GTGATATCCC GGAGATCAAA GTGCTCAGTG GAGAAAAAGT ATCTCAATAT
CACTTTATGA TGAAGGGGAT AACCGGTGAG ACCCATTTGC TGTTTAACGG AACGCCTATT
TATGATGAAG AAGGAAATGT GACCTATGCT GTATTCTTTA CCCAGGACAT AACGGATCAA
ATTCTTCACA AAAGACAGGC TCAGTTGACG CAGAAGCTGA CTGAGCTCAA TATGACAAAA
GATCAGCTCA TTCAGGCAAT TACCCATGAT ATCCGCAACC CTATCGCAAC CCTGGTCAGT
CTGATGGAAC TGCTGGAGGG AAAGGAACGT GACCCAGTCT ATCATGACCC AGACTATCAC
AACCTTTTAA CGACAGTGTC AGATCAGGTC AAATATACCT ATGCTATGAT GGAAAACGTC
TTGAAGTGGT TTCAAAAACA GAAAGAGAAA GTAAGTCTAA ACCCTTCCCA AATCAACTTG
TATCTAAACA CTCAAAAAAC CCTCAGGATT TATGCCAGGC AAGCGGAAGG GAAAGGGATA
GAGGTCAAAA ACAGGATCAC AGCCAATCTG CATGTCTATG CAGACAGGGA GTTAGTGGAA
TTTGTTCTGC GCAATCTCCT GGACAACGCC ATAAAATTTA CGGCCAAAGG CGGAACAATC
GCCATTCAGG CACACTCATC CTCCACCAAC GTGATTGTTT CAGTTACGGA TACCGGAATC
GGGATGGACC CGGCGAGGTT AAGAACCCTG TTCGAGGATG CCACTCCAGG GACCCGGGGA
ACTGAAGGAG AAAAGGGCTT AGGGCTGGGG CTTAGGCTCT GTAAAGAATT CCTGCATAGT
CACGGCGGGG AGATATGGGT GGAAAGTGAA CTGGGAAAAG GAAGCACCTT CAGTTTTTCT
CTCTCAACAT CCGGTAAATC AATTTTTGCA GGGGGAGAAG CATGA
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| Protein sequence | MKFHQQLTLL FAIFSLGLVI CGYRVQDVGI AGVFSLPIQV RAVLAVESVL DIAQKNKMLP
AVSIAGMGIF LGISRYRFLP WLPLARAAAI DAIQEGMIIV DEQGGVVDHN VAVDRFIYDI
IGVKRNVIGK NIESVLSAWP QWQSACKNGH EDEFEIDVSA WGKARFFRVK VYPLQEYNFR
KRGTVSVLTD ITEDRIRGQK TSDSECSGEL VQKELTLLKR QMEMVFSTIS DRALLSIVDR
NGNYLFYTEA VKTQFVEAAA DLTIGSAFRK GLYFYAGGTE MDYCDIPEIK VLSGEKVSQY
HFMMKGITGE THLLFNGTPI YDEEGNVTYA VFFTQDITDQ ILHKRQAQLT QKLTELNMTK
DQLIQAITHD IRNPIATLVS LMELLEGKER DPVYHDPDYH NLLTTVSDQV KYTYAMMENV
LKWFQKQKEK VSLNPSQINL YLNTQKTLRI YARQAEGKGI EVKNRITANL HVYADRELVE
FVLRNLLDNA IKFTAKGGTI AIQAHSSSTN VIVSVTDTGI GMDPARLRTL FEDATPGTRG
TEGEKGLGLG LRLCKEFLHS HGGEIWVESE LGKGSTFSFS LSTSGKSIFA GGEA
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