Gene Dhaf_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1604 
Symbol 
ID7258573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1713131 
End bp1714375 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content47% 
IMG OID643561509 
Producthypothetical protein 
Protein accessionYP_002458089 
Protein GI219667654 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000195543 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAAAT CACCTGAACA ATTATATGAA GAGAGACTTA AAAGAGTAAA TGATGCCATT 
CAGCTTAAAG TCCCTGACCG GGTGCCCCTT ATTCCTATTT TTCAGGCTTT CCCATTTTAC
CATTATGGGG TAACCCTCGA AGAGGCCATG AACGATTATG CTAAAGCAGC TGAGGCCCAT
GACAAGCTTT ATGCGGATTT TGACCCGGAT TTGGCCTGGG ACAACGTTTT GCTGTATCCG
GCCAAAGTTA TGGAATTGCT GGACCTTAAA TGGTTCAGAT GGCCTGGGCA TGGGGTTAGA
GCAAACAGCA TGTATCAATT CCTCGAAGGG GAATACATGA AAGCCAACGA ATATGAAGAG
TTGATTTCCG ATCCTACCAA CTTTATTATG AGCAAGTGGA TCCCCAGGTC TTTCGGTGCC
CTCGAAGCAT TCAGCAATTT GTCTTCCATG AGGGATTCCC TTTGGCTGGG CTGGTTCTCT
TCCTTTTACC CTTTCTCCCT GCCGGAAGTG CAGAAATCCT TGAATACCCT GATGCAAGCC
AGTGAAGAAC TGGCACGCTG GTTTGGCTCG ATCTTTGAGT ATCGTCAGAA ACTGAAGGAA
AAAGGCTTTC CGGCCGCCTG GGGCGCTTTT GCCTTTGCCC CCTTTGATAT GGTGGCGGAT
ACCCTGCGCG GTACAGTCCC GGCTCTGATG GATATGCGCA AACATCCGGA GGAATTGTTG
AGGGCCGTTG AGGCCATGGT CCCGATTGCT ATCGAATCAG GCATTAATTC GGCCAAAACC
ATGGGCAACC CCTTTGTTTG GATCTGGCTG CATAAAGGGG TCGATGATTT CATGTCTGAT
GAGCAATATA AAACCTTTTA CTGGCCTAGC CTGAGAAAAT TGCTGATGGG GCTGATTGAT
GCCGGACTTA CCCCAATGGT TTACGGTGAA GGCAGTATGA ACACGCGCCT GGAGGTTTTA
AGAGACGTAC CTAAAGGCAA AGTCTTATAC CACTTTGAAC ATGTGGATAT GTTCAGAGCC
AAAGAAATAC TGGGCGATGT GGCCTGCATC TCCGGCAATG TGCCTAATTC GTTACTATAC
TTCGGGACTC CCCAGGAGGT CAAAGATTAT TGTAAGAAAC TGATTGATGT TTGCGGCAAA
GACGGCGGCT TCATGATGGA CAGTGGGGCG CTGATTGACG AAGCAAAACC TGAAAACGTC
AAAGCAATGT TCGAATTTAC CAAAGAATAC GGAGTTTACA GATAG
 
Protein sequence
MNKSPEQLYE ERLKRVNDAI QLKVPDRVPL IPIFQAFPFY HYGVTLEEAM NDYAKAAEAH 
DKLYADFDPD LAWDNVLLYP AKVMELLDLK WFRWPGHGVR ANSMYQFLEG EYMKANEYEE
LISDPTNFIM SKWIPRSFGA LEAFSNLSSM RDSLWLGWFS SFYPFSLPEV QKSLNTLMQA
SEELARWFGS IFEYRQKLKE KGFPAAWGAF AFAPFDMVAD TLRGTVPALM DMRKHPEELL
RAVEAMVPIA IESGINSAKT MGNPFVWIWL HKGVDDFMSD EQYKTFYWPS LRKLLMGLID
AGLTPMVYGE GSMNTRLEVL RDVPKGKVLY HFEHVDMFRA KEILGDVACI SGNVPNSLLY
FGTPQEVKDY CKKLIDVCGK DGGFMMDSGA LIDEAKPENV KAMFEFTKEY GVYR