Gene Dhaf_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1603 
Symbol 
ID7258572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1712461 
End bp1713096 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content48% 
IMG OID643561508 
Productcobalamin B12-binding domain protein 
Protein accessionYP_002458088 
Protein GI219667653 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00000910131 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAA AGGCATTGAC GCAGGCCTTA GGTAATCTCG ACGGAGAATC AATGGAAAAA 
ATGCTGAATG AATTTGTTAC CTCAGAGCCC GGTGAAGCCG AGGTCAATAG TGTGGTTGGA 
GCGTGCCAGC AGGGTATGGC TATTGTTGGT GATTTATTTG GGAAAAACGA ATATTTTGTT 
GGCGATCTGA TCTATGCCGG CGAGCTGCTG AACAACGCAC TGGGCATTTT AAAACCGGTG 
ATTGGAGAGG CAAGCACGGA AAAAATCGGC AAAATGGTTT TAGGTACTGT TGAAGGTGAC 
TTGCATGATA TCGGCAAAAA TATCTTCAGA GGCATGATGG AAGCAGCCGG TTTTGAAGTT 
TATGATTTGG GCATTGATAT TCCCGCCGGC GTATTTGTAG AAAAAGTAAA AGAAATAAAG 
CCGCAGATCG TAGGGATGAG CGGTCTTTTG ACCCTGACGC TCGGCGCCAT GAAAGCTACG 
GTGGATGCCT TAACAGCCGC CGGCGTGCGT GACGGGATTA AAATCATTTT GGGAGGCAGC 
CCGGTAACGG AAGATGCCTG CAGGCATATT GGGGCGGATG CCTTCACGGT AAATGCCGCT 
GAAGGGGTAA AGATCTGCCA GGAATGGGTT AAATAA
 
Protein sequence
MDLKALTQAL GNLDGESMEK MLNEFVTSEP GEAEVNSVVG ACQQGMAIVG DLFGKNEYFV 
GDLIYAGELL NNALGILKPV IGEASTEKIG KMVLGTVEGD LHDIGKNIFR GMMEAAGFEV 
YDLGIDIPAG VFVEKVKEIK PQIVGMSGLL TLTLGAMKAT VDALTAAGVR DGIKIILGGS 
PVTEDACRHI GADAFTVNAA EGVKICQEWV K