Gene Dhaf_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1576 
Symbol 
ID7258545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1685401 
End bp1685775 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content43% 
IMG OID643561482 
ProductLrgA family protein 
Protein accessionYP_002458062 
Protein GI219667627 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000178738 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAGG GGTTGCGTTT TATCCTGCAG ATTGCTTTGC TTTGGGTAAT CTATCAATTG 
GGAAATTGGG TAGCGGCAAA AAGCCATCTT CCCATTCCGG GAAATGTTTT GGGTATGATT
ATCTTATTTT TGTTATTGCT GGCGGGAATT GTTAGAATGG AATGGATCGA AGAAGGAGCA
GATTTGCTGC TTAAACATCT AGCTTTTTTC TTTATTCCCA TTGCCGTAGG ATTGATGCAA
TGGATTGGCC TGTTCCAGTT AAGCGGCGTC CAGCTTTTAG TGTCCATTGT TTTGGGCACG
GCAGTATGTG TTATGGTTAT GAACTCAGTG ACCGCCTTGC TGGTCCGGTT TTGTTCACCT
AAAGGAGGAG TTTAA
 
Protein sequence
MAQGLRFILQ IALLWVIYQL GNWVAAKSHL PIPGNVLGMI ILFLLLLAGI VRMEWIEEGA 
DLLLKHLAFF FIPIAVGLMQ WIGLFQLSGV QLLVSIVLGT AVCVMVMNSV TALLVRFCSP
KGGV