| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1570 |
|---|
| Symbol | |
|---|
| ID | 7258539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1677033 |
|---|
| End bp | 1678193 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643561476 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002458056 |
|---|
| Protein GI | 219667621 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000026871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCACACGT TAGATACAGC GCAAGAAGAG ACGGGATTGC TTTTCCTGAT GGTCTTCGGA
GGTGGGGGTG AAACAAAAGT GAAAAATATC TTGAATTACC AAAAGCCGGC TTCATGGATT
AGGGTTGTGG CTTTGATTTT CTGTATTGGA GTTGCCTTAT GCTTTCTGAC CAATCCCAAA
AACAGCCCAA CCCCCGAAGC GGCTATCGCC CGGGCATTGG GGCTGGCGGA AAACGAGATT
ACAGTGTTCG GTACTTACGA AACCTGGGAG GAGGGGTGGT ATATCCTGGG GTTTCTTGCC
GACCGCAGCG AAGCGAGATC CGATCTGGGC GCAGCGCTGT TTCGGCAGGA AGGTGATCAA
TACAGCCTGG AGAGCTATTA TCGGTGTAAA GACGGAGCCA TTTCCCAAGA CAAAATAGTT
GTCTGCTCTT TCAGCAAAAC ACCTTCGAAG TATGATGTAA TCCTCAGCAA TAATGAAAAT
CTGGCCCGCA TCCAACGCAC GATCAACGGT GTGGCCGATT CCAGCTATGT GGGCGGCACT
ATTCCCGGTA TGACCGTTCT AAGGTGCCCG GATGACCAGT ATTCCTCGGC CGAGTTTCAG
TTTTATGATC AATCCGGCCG GCAAATCGAC GACTATGTTG CCAGCAATAC AGTGCTGAAC
AGGGGAGAAT ATGAACCGAA GGGAATCGTC TCCCTTGCCC TTTGGAGTTC AGCCACGCCG
GGATATTTCC TGGAAAGTGC CGTGGGTACA ACCTTCGGCA TTTATCCGGA GCGGTTCCAG
GTGAGCATTA CCGACGCTAC AAGAGCTGCC TTTGTCGGAA ATGTTCTCTA TGAAGGCCCC
CAATATATCA CAGCGGATGT GGGGGACAGG ATTGAGATCA TGAGTTCAAG GGGAGAAAAT
GGCCCCGAGC CTCTGACCAT GGACGTATCC TCCTATTCCC CCAGGCTATG CTACCAGGTG
TTCACTGCGG ACGGTACGGA TACCGGCTAC CGGATCTTCC GTATGGGCGG CGAAACATGG
ATCGGTCATT GGGGCTTATA CGGCACAGCA CAAAACAGCT GGTGGTGCGA GTATATTTTC
AGGGTTAACC CATCCGGAGC CGGGTCACCC GGTTCGGCTA TTTTAAAATT CGCCGTTTCG
GGGATGGACT CATCTAGATG A
|
|---|
| Protein sequence | MHTLDTAQEE TGLLFLMVFG GGGETKVKNI LNYQKPASWI RVVALIFCIG VALCFLTNPK
NSPTPEAAIA RALGLAENEI TVFGTYETWE EGWYILGFLA DRSEARSDLG AALFRQEGDQ
YSLESYYRCK DGAISQDKIV VCSFSKTPSK YDVILSNNEN LARIQRTING VADSSYVGGT
IPGMTVLRCP DDQYSSAEFQ FYDQSGRQID DYVASNTVLN RGEYEPKGIV SLALWSSATP
GYFLESAVGT TFGIYPERFQ VSITDATRAA FVGNVLYEGP QYITADVGDR IEIMSSRGEN
GPEPLTMDVS SYSPRLCYQV FTADGTDTGY RIFRMGGETW IGHWGLYGTA QNSWWCEYIF
RVNPSGAGSP GSAILKFAVS GMDSSR
|
|---|
| |