Gene Dhaf_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1555 
Symbol 
ID7258524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1659535 
End bp1660740 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content48% 
IMG OID643561461 
ProductSaccharopine dehydrogenase 
Protein accessionYP_002458041 
Protein GI219667606 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000142738 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAG CCTTGATTAT TGGGGCCGGC GGTGTGGCCA ATGTGGTCGC CCACAAATGC 
TGTCAAGTTC CTGAGGTGTT TGAGGAAATT TGCATTGCGA GCCGGACGCT GAAAAAATGC
GAGGATATTC GAGATAAATT AACCGGCAGC CGGACTAAAG TCAGGGTCGC TCAGGTTGAT
GCCGATCAGA CAGAAGAAGT CATCCAACTC ATTAAGGAGT TTCAACCGGA GCTGGTGATC
AACGTGGCCC TTCCTTATCA GGACCTGACC ATTATGGAGG CCTGTCTGGC CACCGGCGTT
CATTATGTGG ACACTGCCAA CTATGAACCC CCCAATGTGC CGAAATTTGA ATACAAATGG
CAATGGGCCT ACCGGGAAAA ATTTGCCCAA GCCGGATTAA CGGCTTTATT GGGAAGCGGT
TTTGATCCCG GGGTAACCGG TGTTTTCTGC GCCTATGCCC AAAAGCACTA TTTTGATGAG
ATTCATACCA TCGATATTGT CGATGCCAAT GGCGGGGATC ATGGTTATCC TTTCGCCACT
AATTTCAACC CGGAGATCAA TATTCGGGAA ATCACTGCCA AGGGTCGTTA TTATAAAGAG
GGAGAGTGGA TTGAAACCGA TCCCCTGTCC GTGAAGAAGG TCTATGATCT TGAGGAGATT
GGGCCCAAGA ATATCTACCT GCTCTATCAT GAAGAGCTGG AATCTTTAGC ACAGAATATT
AAGGGAATCA AACAGATCCG TTTCTGGATG ACCTTCTCCG ATAATTATCT CAACCATTTA
AAGGTTCTGG AAAATGTGGG CATGACTTCC ATCGAACCTA TTGAGTTTGA GGGTCAGCAA
ATCATTCCCC TCCATTTCCT CAAGGCTGTC CTGCCTGATC CGGCCTCCCT GGGACCGCGA
ACCAAGGGCA AAACCAATAT CGGCTGCATT ATCCAAGGAG TCAAGGATGG TCAGCCCCGC
ACCTATTATG TCTACAATAT CTGCGATCAC CAGGAATGCT ATGCTGAAGT GGGCTCTCAG
GCTATCTCCT ATACCACCGG GGTACCGGCC ATGATCGGCG CTAAGTTGAT TATGGAAGGA
AAATGGCAGA AGCCCGGCGT TTATAATGTT GAAGAGTTTG ATCCCGATCC CTTTATGGCA
GACCTGAATA AGTACGGATT GCCTTGGCGG GAAGATTTTG CCCCCACATT ATTGGATGAG
GAATAA
 
Protein sequence
MGKALIIGAG GVANVVAHKC CQVPEVFEEI CIASRTLKKC EDIRDKLTGS RTKVRVAQVD 
ADQTEEVIQL IKEFQPELVI NVALPYQDLT IMEACLATGV HYVDTANYEP PNVPKFEYKW
QWAYREKFAQ AGLTALLGSG FDPGVTGVFC AYAQKHYFDE IHTIDIVDAN GGDHGYPFAT
NFNPEINIRE ITAKGRYYKE GEWIETDPLS VKKVYDLEEI GPKNIYLLYH EELESLAQNI
KGIKQIRFWM TFSDNYLNHL KVLENVGMTS IEPIEFEGQQ IIPLHFLKAV LPDPASLGPR
TKGKTNIGCI IQGVKDGQPR TYYVYNICDH QECYAEVGSQ AISYTTGVPA MIGAKLIMEG
KWQKPGVYNV EEFDPDPFMA DLNKYGLPWR EDFAPTLLDE E