Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1555 |
Symbol | |
ID | 7258524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1659535 |
End bp | 1660740 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643561461 |
Product | Saccharopine dehydrogenase |
Protein accession | YP_002458041 |
Protein GI | 219667606 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000142738 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAAAAG CCTTGATTAT TGGGGCCGGC GGTGTGGCCA ATGTGGTCGC CCACAAATGC TGTCAAGTTC CTGAGGTGTT TGAGGAAATT TGCATTGCGA GCCGGACGCT GAAAAAATGC GAGGATATTC GAGATAAATT AACCGGCAGC CGGACTAAAG TCAGGGTCGC TCAGGTTGAT GCCGATCAGA CAGAAGAAGT CATCCAACTC ATTAAGGAGT TTCAACCGGA GCTGGTGATC AACGTGGCCC TTCCTTATCA GGACCTGACC ATTATGGAGG CCTGTCTGGC CACCGGCGTT CATTATGTGG ACACTGCCAA CTATGAACCC CCCAATGTGC CGAAATTTGA ATACAAATGG CAATGGGCCT ACCGGGAAAA ATTTGCCCAA GCCGGATTAA CGGCTTTATT GGGAAGCGGT TTTGATCCCG GGGTAACCGG TGTTTTCTGC GCCTATGCCC AAAAGCACTA TTTTGATGAG ATTCATACCA TCGATATTGT CGATGCCAAT GGCGGGGATC ATGGTTATCC TTTCGCCACT AATTTCAACC CGGAGATCAA TATTCGGGAA ATCACTGCCA AGGGTCGTTA TTATAAAGAG GGAGAGTGGA TTGAAACCGA TCCCCTGTCC GTGAAGAAGG TCTATGATCT TGAGGAGATT GGGCCCAAGA ATATCTACCT GCTCTATCAT GAAGAGCTGG AATCTTTAGC ACAGAATATT AAGGGAATCA AACAGATCCG TTTCTGGATG ACCTTCTCCG ATAATTATCT CAACCATTTA AAGGTTCTGG AAAATGTGGG CATGACTTCC ATCGAACCTA TTGAGTTTGA GGGTCAGCAA ATCATTCCCC TCCATTTCCT CAAGGCTGTC CTGCCTGATC CGGCCTCCCT GGGACCGCGA ACCAAGGGCA AAACCAATAT CGGCTGCATT ATCCAAGGAG TCAAGGATGG TCAGCCCCGC ACCTATTATG TCTACAATAT CTGCGATCAC CAGGAATGCT ATGCTGAAGT GGGCTCTCAG GCTATCTCCT ATACCACCGG GGTACCGGCC ATGATCGGCG CTAAGTTGAT TATGGAAGGA AAATGGCAGA AGCCCGGCGT TTATAATGTT GAAGAGTTTG ATCCCGATCC CTTTATGGCA GACCTGAATA AGTACGGATT GCCTTGGCGG GAAGATTTTG CCCCCACATT ATTGGATGAG GAATAA
|
Protein sequence | MGKALIIGAG GVANVVAHKC CQVPEVFEEI CIASRTLKKC EDIRDKLTGS RTKVRVAQVD ADQTEEVIQL IKEFQPELVI NVALPYQDLT IMEACLATGV HYVDTANYEP PNVPKFEYKW QWAYREKFAQ AGLTALLGSG FDPGVTGVFC AYAQKHYFDE IHTIDIVDAN GGDHGYPFAT NFNPEINIRE ITAKGRYYKE GEWIETDPLS VKKVYDLEEI GPKNIYLLYH EELESLAQNI KGIKQIRFWM TFSDNYLNHL KVLENVGMTS IEPIEFEGQQ IIPLHFLKAV LPDPASLGPR TKGKTNIGCI IQGVKDGQPR TYYVYNICDH QECYAEVGSQ AISYTTGVPA MIGAKLIMEG KWQKPGVYNV EEFDPDPFMA DLNKYGLPWR EDFAPTLLDE E
|
| |