| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1520 |
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| Symbol | gatB |
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| ID | 7258489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1619244 |
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| End bp | 1620698 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643561428 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_002458008 |
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| Protein GI | 219667573 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00190306 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATTT TTGAACGTTA TGAAATGGTC TGCGGCGTGG AAGTTCATGT GGAGCTGGCC
ACCAAGACCA AGATTTTCTG CAATTGCTCC ACTGAGTTTG GGGGAGAGCA GAATACCCAT
GTCTGCCCCG TTTGCCTGGG GCTGCCCGGA GTATTGCCGG TCCTCAACCG TGAAGTGGTC
AATCTGGCCA TTAAAGCAGG TCTGGCTTTA AATTGCGACA TTGCCGACTT CTCTAAATTC
GATCGTAAGA ATTACTTTTA TCCCGATGCC CCCAAGAACT TTCAGACATC CCAATATGAT
CTGCCCATCT GCAAAAACGG CTGGTTGGAA TTTGCAGTGG ACGGAGAAAA GAAGCGGGTG
GGCATAACCC GGGCCCATAT GGAAGATGAT GCCGGAAAAT TGGTGCATAG CGGTGCCACC
ATCTCCACCT CGGAGGAGTC TTTTGTGGAT TACAACCGGA CCGGAGTGCC GCTCCTGGAG
ATTGTCTCAG AACCGGATAT GAGGTCTATT GCCGAAGTGG TAAGCTTTTT AGAAGAAATG
GTGCGGACCA TTCAGTACAC GGAAGTCTCC GATTGCCGGA TGGAACAAGG CTCGGTCCGC
TTTGATATCA ATGTGTCCCT GCGCCCCCAC GGACAGAAGG AGTTTGGTAC CCGGACCGAA
ACGAAGAATC TCAATTCCTT CAGCTCGGTA CGGCGCTGCC TGGAATATGA AATTGAGCGG
CAAGCCCGGC TTTTGGATGA TGGGGAAAAA GTTATTCAGG AAACCCGGAC CTGGGATGAG
GGGAAGGGAG TCACCCTTTC CTTGCGTTCT AAAGAGGAGG CCCATGATTA CCGCTATTTT
CCTGAGCCGG ATCTGGTGCC CCTGGTCATC GCCAGGGAGT GGGTGGAAGA AATTCGTCAA
ACCCTTCCGG AAATGCCCGG GGCTCGCCGG GAACGCTATC AGTCCCTGGG ACTGACGGAA
TATGACGCAG GAGTGCTTAC CGCGGCGAAA GCGCTGTCGG ATTTTTTTGA TGAAGCGCTG
CAGAGCTATA GCGATGCCAA GGCCCTGGCC AATTGGGTGA TGGGGGAATT CACCCGTCTC
CTCAATGCCA AACAAATCAG TGTGGAAGAA TCCCCGGTTC GGCCCTCTCA GCTGGCTGAA
CTCCTGACTT TGATCGAAAA AGGTGCCATC AGCGGTAAGA TCGGCAAAAC GGTTATCGAA
GCAATGTTTG AATCCGGGAA GGATCCGGAA GTTATCATCA AGGAGAAGGG CTTAGCCCAA
ATCAGCGATA CGGCTGCCTT GTTGAAGCTG GTGGATGAAG TGATTGCCGC TCATCCCCAA
TCGGTGGAAG ATTATAAGGC CGGCAAAGAC CGGGCCATCG GTTTCCTGGT CGGCCAGATT
ATGAAGGCCA CTAAAGGCCA GGCGAACCCT GGCGTGGTCA ACGACTTGCT GAAGGAGCAG
CTGGCGAAAT TTTAA
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| Protein sequence | MSIFERYEMV CGVEVHVELA TKTKIFCNCS TEFGGEQNTH VCPVCLGLPG VLPVLNREVV
NLAIKAGLAL NCDIADFSKF DRKNYFYPDA PKNFQTSQYD LPICKNGWLE FAVDGEKKRV
GITRAHMEDD AGKLVHSGAT ISTSEESFVD YNRTGVPLLE IVSEPDMRSI AEVVSFLEEM
VRTIQYTEVS DCRMEQGSVR FDINVSLRPH GQKEFGTRTE TKNLNSFSSV RRCLEYEIER
QARLLDDGEK VIQETRTWDE GKGVTLSLRS KEEAHDYRYF PEPDLVPLVI AREWVEEIRQ
TLPEMPGARR ERYQSLGLTE YDAGVLTAAK ALSDFFDEAL QSYSDAKALA NWVMGEFTRL
LNAKQISVEE SPVRPSQLAE LLTLIEKGAI SGKIGKTVIE AMFESGKDPE VIIKEKGLAQ
ISDTAALLKL VDEVIAAHPQ SVEDYKAGKD RAIGFLVGQI MKATKGQANP GVVNDLLKEQ
LAKF
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