Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1499 |
Symbol | |
ID | 7258468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1594204 |
End bp | 1595346 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643561407 |
Product | ApbE family lipoprotein |
Protein accession | YP_002457987 |
Protein GI | 219667552 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000152679 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTACAGA GTGCTAGGCT GGTCACTATA AGCAATAAAG AGGGTTTAGA GATAAAGGAG CTGGAGTTGT TGTTTGACAA GAAAAAGTGC GGAAGAAAAA AACTATCGTT TGTAGCAGTT GCCTTGATAA CACTGGGACT ACTGACTGCA TGCAATGGGA AACCTGTACA ACAGGAAGAA GTTAAGAAGT TTGAAAGCAC GGATATTGCC ATGGGTACGG TAATATCGCA AAGAGTCTTT GGCGATAATG GACAGGCTGC CATCGACGCA GCACTGGAGA AGATAAAGAG TTTGGAAGCA CTTTTGACCT TCAATGCTCC AGGAGGAGAC GTTAATAAAC TCAATGATTA TGCCGGGAAG CAAAGTGTAG AACTCCAGCC GGAGACCTTG CTTGTCTTGA AAGAATCTCA GGAAGTAGCT GAACTCAGCG GCGGAGCCTT TGACGTGACT GTGGGTCCCA TCGTGAAAAG CTGGGGGATT GGTACGGACA ATGCCCGGAT TCCTTCTGAG ACAGAATTGA AAGAGCTGCT GCCTCTTGTT AATTATAAAA ATCTGCTTAT TGAGGGAAAC ACAGCCTATC TTAAACAAGC AGGCCAGATG GTGGACCTGG GTGGTATTGC CAAAGGGTAC GCCGGAGATG CGGCTATTGA AGTCTATAAA AAGCAAGGCA TCACCTCAGC TTTTATCAAC CTCGGCGGTA ATGTGGTGAC CTTGGGGACT AAGCCGGATG GCAGCTCCTG GACCGTAGGG GTGCGTAACC CTCGTCCTGC CGGTGAAGAG GATCAGATCG TGGGTATGAT TACTGTGGCG GATAAAGCGG TTGTGACGGC CGGTGATGAT CAGCGCTATT TTGAAGTAGA CGGGGTGCGC TACCACCATA TTCTCAATCC TCACACAGGC TATCCGGCCC AATCGGATTT GATGAGCGTC ACCTTGGTGA CGGATTCCTC TTTGCTGGCT GATGCTCTGG ATACGGCAGT ATATATTCTC GGTTTGGAAA AAGGCCGGGA GATGCTCGAA AACTATGGCG GGGTGGAAGC GGTTTTTATC ACCAGAGATA AAAAGATCTA TGTCACAGAT GGGTTAAAGG ACAGCTTTGA ATTTTTTGAC GAAAGCAAAG AGTACGAATT CGTCAAAGAT TGA
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Protein sequence | MLQSARLVTI SNKEGLEIKE LELLFDKKKC GRKKLSFVAV ALITLGLLTA CNGKPVQQEE VKKFESTDIA MGTVISQRVF GDNGQAAIDA ALEKIKSLEA LLTFNAPGGD VNKLNDYAGK QSVELQPETL LVLKESQEVA ELSGGAFDVT VGPIVKSWGI GTDNARIPSE TELKELLPLV NYKNLLIEGN TAYLKQAGQM VDLGGIAKGY AGDAAIEVYK KQGITSAFIN LGGNVVTLGT KPDGSSWTVG VRNPRPAGEE DQIVGMITVA DKAVVTAGDD QRYFEVDGVR YHHILNPHTG YPAQSDLMSV TLVTDSSLLA DALDTAVYIL GLEKGREMLE NYGGVEAVFI TRDKKIYVTD GLKDSFEFFD ESKEYEFVKD
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