| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1470 |
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| Symbol | |
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| ID | 7258439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 1561681 |
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| End bp | 1563120 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643561378 |
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| Product | 40-residue YVTN family beta-propeller repeat protein |
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| Protein accession | YP_002457958 |
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| Protein GI | 219667523 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00488394 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGACTCACA GTTTGCTCGC TTGGGTGAGT ATGCCGGCAA TTGACTCCTC GTTGCCGGGT
GATATTGCTG TCTATCATAT GGAATCAGAA AAGCTCCTCG GGATGATTCC CGTGGGGATC
GGCCCCGGAT ACTTAACCTG CTTTCCGGAA GGTAAAAAAC TTTATGTCCC CAATCGCGGA
AGTGCTACCC TTTCCGTAAT TGATTGTGAC TCCTTCATTG TAAAAAGGAC CATCCCCGTC
GGAAAAAACC CTCAAGCTCT GGTAATCGAT TCTGCGGGTG CCAAGGGGTA TGTTGCCGGC
ACTGAAGAGC AGATCATCTC GGTTATCGAT CTGCATAAAG ATGAAGTGAT AAATACCATT
CCCTTAAATT TATACCCCAG CGGCCTTGCT CTATCCCGTG ATGGCAAAAA GCTTTATGTA
TCCCACCAGG CTGGCTGTTC CATTTCCATC ATCGACACAG AGCATCATCA AGCTGCGGAC
ACTTTTCATC TCAAGGATTA CCCAAAGAAT TCTCCTTTAT CTTCCCCAGA CCTAGCTTTA
TCCCCCGTAG GCCTGGCCTT ATCTCCTGAC GGTACCCTCC TCTACCTCAT TCTATCCCCT
GAAAATCGGG TTTCCGTAGT CGACCTTGGC CTGCGGGGGG AAGTCGCCTC AATCCCGGTA
GGCCGGAATC CCCAGCGGAT TGCGCTCCAT CCCAGTCGGC CCCTCGCTTA CGTTACGAAC
CATGATTCCG ATTCCATCAG CATTATCTCC ACCTACGAAC ATCAGGTACT TGCAACCATA
CCGTCACTAT CTGCTCCTCG TGAGCTTACC CTGACTCCGG AGGGTTCCCA ACTCTGGGTA
ACCAATGGTT GCCAGCTTAC TCTGATCGAT ACTGAAACCA AGGCAATCAT CAGCACTCTC
TATGCCCCGC TCTCAGTCCA AACCCGTCAA GGGGTTGCCA TAAGTGAGAG CCATCGTCAA
TTGCTTCTAT CTGAGGTCCT CCCCTGCAAC ACTCAAAGGC CCTATTCCTT TGTCACGGAA
AAGCTCTATT TTAAACCGCC TAAGCCCTTT GACCTTACCA TTCATCACCA GTTCCCCATA
CCCGCAGCTA TTGCCGAAGG ATTAATCTTT GAGGAGGCCG AAGTCAAACA TCATTCCATC
AGTATCCTCC CCATTCCACT TCGGCCTAAT TATCATCATC TCACCTTTTC CCTGCGGATT
CCTTATAAAA TTATTTATCG AGATGAGCAA AACCAGCTTC ACGAGCTAAA GGATGCTATC
CACCATGTGC TCTCTGCTGT AGAAACCCAT CTTACTCCAT CTCGAATCAA ACAGAATTTC
AACTTAAGGA TCTTTACTCA ATCCGAAGTC ATTGGCAAGT CCGTTCCCAC CCCCAACTCC
CTGGACCTCA TTATCCGGAC CCAGCTTGTG GCCATGCAGC AGATCCACCC CACAGAATAA
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| Protein sequence | MTHSLLAWVS MPAIDSSLPG DIAVYHMESE KLLGMIPVGI GPGYLTCFPE GKKLYVPNRG
SATLSVIDCD SFIVKRTIPV GKNPQALVID SAGAKGYVAG TEEQIISVID LHKDEVINTI
PLNLYPSGLA LSRDGKKLYV SHQAGCSISI IDTEHHQAAD TFHLKDYPKN SPLSSPDLAL
SPVGLALSPD GTLLYLILSP ENRVSVVDLG LRGEVASIPV GRNPQRIALH PSRPLAYVTN
HDSDSISIIS TYEHQVLATI PSLSAPRELT LTPEGSQLWV TNGCQLTLID TETKAIISTL
YAPLSVQTRQ GVAISESHRQ LLLSEVLPCN TQRPYSFVTE KLYFKPPKPF DLTIHHQFPI
PAAIAEGLIF EEAEVKHHSI SILPIPLRPN YHHLTFSLRI PYKIIYRDEQ NQLHELKDAI
HHVLSAVETH LTPSRIKQNF NLRIFTQSEV IGKSVPTPNS LDLIIRTQLV AMQQIHPTE
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