Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1406 |
Symbol | groEL |
ID | 7258376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1512641 |
End bp | 1514275 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643561318 |
Product | chaperonin GroEL |
Protein accession | YP_002457898 |
Protein GI | 219667463 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000472194 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAAAAC AAATCGTTTT CAATGAAGAA GCTCGCCGCG CATTAGAGCG TGGTGTTAAT GCCCTGGCTG AGTCTGTCCG GGTAACTCTT GGACCTAAAG GCCGTAATGT GGTTTTGGAC AAAAAATTCG GCGCTCCTTT GATTACCAAT GATGGTGTGA CTATCGCCCG GGAAATTGAG CTGGAAGATC CATTCGAGAA TATGGGGGCC CAACTTGTCA AGGAGGTTGC AACCAAAACC AATGATGTAG CAGGGGATGG AACCACCACT GCAACTGTAT TGGCCCAAGC GATTATCCGT GAAGGCTTAA AGAATGTAGC TGCCGGTGCT AATCCTATGG GCATCAAGCG AGGCATTGAG AAGGCTGTTG AATCTGTTGT CGAGGATATT AAAACCAATG CAAAGCCCAT TGAAAGCAAG GAATCCATCG CTCAAGTAGC TTCTATCTCC GCCGGCGATG ACAACATCGG CGTTCTGATT TCTGATGCTA TGGAAAAGGT CGGCAAAGAC GGCGTAATCA CCGTAGAAGA AGCTAAAGGA ATGACCACCG AGCTCAAAGT TGTCGAAGGT ATGCAATTTG ACCGGGGCTA TCTCTCTGCA TATATGATCA CCGATACTGA TAAGATGGAA GCTATTTTAA ATGATCCTTA CATCTTAATT ACCGATAAAA AGATTGGCGC TATCGCCGAC ATTCTCCCTG TTCTTGAGAA AGTCGTTCAA GCCGGCCGTC AACTTCTGAT TATTGCCGAA GATATCGAAG GGGAAGCTTT GGCTACCCTC ATTCTCAACA AACTCCGCGG AACCTTTACC TGCGTTGCTG TAAAAGCTCC TGGCTTCGGT GATCGCCGTA AGGCAATGCT GGAAGATATC GCAATCCTCA CCGGTGGTAC CGTCATTACC GAAGATCTTG GCTTAAAGCT GGAAAACACT ACGATTGATA TGCTGGGCCG TGCTCGTCAA ATTCGCGTAA CTAAAGAAGA AACCACCATT GTTGAAGGCT CCGGTTCTCA AGATGATATT AAGAGCCGTG TGGAAGCCAT TAAAAAGCAA ATCGACGAAA CGACTTCTGA TTTCGACCGG GAAAAACTTC AAGAGCGTTT GGCTAAATTA GCCGGCGGGG TTGCTGTGAT TCAAGTAGGT GCTGCAACAG AAGTTGAAAT GAAAGAAAAG AAACTCCGCA TTGAAGATGC TTTAGCTGCA ACCCGTGCAG CAGTTGAAGA AGGTATCGTA GCCGGTGGTG GCTGCGCGTT AGTGGATGCT GCTAAAGCGC TTGACAGCCT TAAGCTGACC GGAGACGAAA AGACCGGTGT AGCTATTGTA TGCCGTGCTT TGGAGGAACC TCTCCGTCAA ATTGCCAATA ATGCAGGATT TGAAGGCTCC ATCGTTGTGG AGAAGGTTCG CAATGGCGGC CGTGGGGTAG GATTCAACGC TCTGACCGAA GCATATGAAG ATATGATTGC AGCCGGTATC GTTGACCCCG CTAAAGTGAC ACGTTCTGCC CTGCAGAATG CAGCTTCCAT CGCTGCTATG CTCCTTACTA CCGAGTGCTT AGTTTCCGAT ATCCCATCAA AGGATAATGG TGCGGCTGCT ATGGCTGGTA TGGGCGGCAT GGGTGGAATG GGCGGCATGA TGTAA
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Protein sequence | MAKQIVFNEE ARRALERGVN ALAESVRVTL GPKGRNVVLD KKFGAPLITN DGVTIAREIE LEDPFENMGA QLVKEVATKT NDVAGDGTTT ATVLAQAIIR EGLKNVAAGA NPMGIKRGIE KAVESVVEDI KTNAKPIESK ESIAQVASIS AGDDNIGVLI SDAMEKVGKD GVITVEEAKG MTTELKVVEG MQFDRGYLSA YMITDTDKME AILNDPYILI TDKKIGAIAD ILPVLEKVVQ AGRQLLIIAE DIEGEALATL ILNKLRGTFT CVAVKAPGFG DRRKAMLEDI AILTGGTVIT EDLGLKLENT TIDMLGRARQ IRVTKEETTI VEGSGSQDDI KSRVEAIKKQ IDETTSDFDR EKLQERLAKL AGGVAVIQVG AATEVEMKEK KLRIEDALAA TRAAVEEGIV AGGGCALVDA AKALDSLKLT GDEKTGVAIV CRALEEPLRQ IANNAGFEGS IVVEKVRNGG RGVGFNALTE AYEDMIAAGI VDPAKVTRSA LQNAASIAAM LLTTECLVSD IPSKDNGAAA MAGMGGMGGM GGMM
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