Gene Dhaf_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1383 
Symbol 
ID7258353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp1488375 
End bp1489505 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content50% 
IMG OID643561295 
ProductCystathionine gamma-synthase 
Protein accessionYP_002457875 
Protein GI219667440 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000000104291 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTT TAACCGAACT GGCTCAGATC GGCAATCGCC GGGATCCTTA CGGGGCGATC 
AGCTTTCCTG TTTACCATTC ATCTACCTTT GCTCACCCCG GCTTCGGCCA AAGCACAGGC 
TTTGATTACT CACGAACCGG CAATCCCACC CGCCAAGCTT TAGAAGATGC TATGGCAAGC 
CTGGAAGAGG GTACCAAAGG GTTTGCTTTT TCCTCAGGCA TGGGTGCCAT CACTACCATC 
CTCTCCTTAT TCTCTCAGGG CGAGCATCTT CTCGTCACCG AAGATCTCTA TGGAGGAACC 
TACCGTATCC TTGAGGAGGT CTTCAGCCGC TTTGGCCTCC AAGTCACTTT TGTTGATTCC 
AGTGATCTCG ACACCATCGC AAAAGAGATC CGCCCCCACA CAAAAGCCAT CTTCACCGAA 
ACACCTACCA ACCCTCTAAT GAAGATTGCC GACCTAAAGG GGATCGCTTC CTTGTGCCAG 
AAGCACGGTC TCTTAAATAT AGTGGACAAT ACTTTTCTTA CACCCTATTT GCAAAAACCA 
CTGAACTTGG GAGCAGACAT TGTTATTCAT AGTGGCACCA AATATCTTGG CGGCCATAAT 
GATGTCGTGG CGGGCCTCGT CGTGGTTCAA GGAGAAGAGC TTGCAGCTCG CTTTGGACGT 
TTGCAGAACT CTCTCGGCGC TACATTGGGC CCCCAAGATT CCTGGCTAAT TATCCGGGGA 
TTGAAAACCT TGGCCCTGCG CATGAGAGCA CAAGAAGAAA ATGCCCTCCA GATTGCACAA 
TGGCTGGAGA CGCATCCCCT TGTCACCGCG GTCTGTTATC CCGGACTTAA GCATCATCCC 
GGCTATGCAA CTCAGCTTGA ACAAGCCCGG GGCTTCGGTG CTATGCTATC TTTCCGGGTA 
AAAAGTCCCA GCTTAATCCC CGAGATATTA AAATCCCTCA AAATTATCTC CTATGCGGAA 
AGCCTTGGTG GTGTAGAATC TCTAATCACT TATCCCGCTA CCCAAACCCA TGCCGATATC 
CCTCACGAAG TAAGGACAAG GCTTGGGGTG GACGATTGTC TTCTCCGGTT ATCACTGGGT 
ATTGAAGCCG CCGAGGATCT CATTGGCGAT TTAGAACAAG CTTTAAAATA G
 
Protein sequence
MNILTELAQI GNRRDPYGAI SFPVYHSSTF AHPGFGQSTG FDYSRTGNPT RQALEDAMAS 
LEEGTKGFAF SSGMGAITTI LSLFSQGEHL LVTEDLYGGT YRILEEVFSR FGLQVTFVDS 
SDLDTIAKEI RPHTKAIFTE TPTNPLMKIA DLKGIASLCQ KHGLLNIVDN TFLTPYLQKP 
LNLGADIVIH SGTKYLGGHN DVVAGLVVVQ GEELAARFGR LQNSLGATLG PQDSWLIIRG 
LKTLALRMRA QEENALQIAQ WLETHPLVTA VCYPGLKHHP GYATQLEQAR GFGAMLSFRV 
KSPSLIPEIL KSLKIISYAE SLGGVESLIT YPATQTHADI PHEVRTRLGV DDCLLRLSLG 
IEAAEDLIGD LEQALK