Gene Dhaf_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1311 
Symbol 
ID7258281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1411566 
End bp1412570 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content49% 
IMG OID643561223 
Productcytochrome d ubiquinol oxidase, subunit II 
Protein accessionYP_002457803 
Protein GI219667368 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000305434 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTAA ATATTCTGTG GTTTATCCTG ATTTCCGTAC TCTTCATCGG TTTCTTTTTC 
TTAGAAGGCT TTGACTATGG GGTAGGGATT CTTCTCCCTT TCATGGGCAA AAACGATACC
GAGCGCCGTA TTGTGATCAA TACCATCGGG CCGGTTTGGG ATGGCAATGA AGTATGGCTG
ATTACCGCGG GTGGTGCTAT CTTTGCTGCG TTTCCCAACT GGTATGCCAC TCTTTTCAGC
GGTTTCTATT TAGCCCTGTT CTTTATTCTG GTGGCTTTGA TCCTTCGCGG CGTAGCTTTT
GAATTCCGCA GCAGTGATCG CTCTCCGCGC TGGCGCTCTG CTTGGGATGG AGGAATTTTC
GTCGGCAGCT TGCTTAGTGC CATTCTCTGG GGTGTGGCAG TTACCAATAT CTTACGGGGT
GTGCCTATCA ATGGGGAGAT GCAGTATGTA GGGACCTTTT TTGACCTCTT ATCACCCTAC
ACACTCCTTG GCGGAGTCAC CACTCTCCTT TTATTCACCG TACATGGCGC CCTCTATCTG
ACCTTAAAGA CGGAAGGTGA AATGGTTCGG AGGGCTTGGG GCATAGCTAA AGCAGTAAGC
GTTGCAGCTC TTGTCGTCCT TGTCCTTCTC GCGGCTATGA CCTATTTACA AACTGATCTT
TTCCTAAGCA CTCCGGCCAC CCTGGGAATT CTGGTGTGTG CCCTGGCCAT GATTCTGACC
GTGCTGTTTA CTTATAAGAA AGCCGCTGGC AAGGCATTTA TAGCCAGCAG CCTGACTATT
GCATCTTTAG TGCTCTCCGT GTTCTTGGGA CTTTTCCCAC GGGTCATGGT GTCCAGCCTG
AATCCTGAAT GGAGCCTGAA TATCTACAAT GCTTCATCCA GCCCCTACAC CTTAAAGATC
ATGACCATAG TCGCTTTGAC TTTGGTGCCG ATTGTTCTGG CTTATCAGAT CTGGACCTAC
TGGGTATTCC GCAAACGTGT CACAGCGAAG GATGTTCATT ATTAA
 
Protein sequence
MDLNILWFIL ISVLFIGFFF LEGFDYGVGI LLPFMGKNDT ERRIVINTIG PVWDGNEVWL 
ITAGGAIFAA FPNWYATLFS GFYLALFFIL VALILRGVAF EFRSSDRSPR WRSAWDGGIF
VGSLLSAILW GVAVTNILRG VPINGEMQYV GTFFDLLSPY TLLGGVTTLL LFTVHGALYL
TLKTEGEMVR RAWGIAKAVS VAALVVLVLL AAMTYLQTDL FLSTPATLGI LVCALAMILT
VLFTYKKAAG KAFIASSLTI ASLVLSVFLG LFPRVMVSSL NPEWSLNIYN ASSSPYTLKI
MTIVALTLVP IVLAYQIWTY WVFRKRVTAK DVHY