Gene Dhaf_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1294 
Symbol 
ID7258264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1393364 
End bp1394206 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content43% 
IMG OID643561206 
Productglycosyl transferase family 8 
Protein accessionYP_002457786 
Protein GI219667351 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTT TAGTCACCCT GAACTCAAGT TATGTAAAAC AGTTAATGGT TATGCTGACC 
TCTCTGCTTG ACTCCAACCC AGGGGAGCAG TTTACGGTTT ATGTAGCTCA TTCCGCTATG
TCCAAGGAGG ACTTTGCACG TATCGATCAG GCCATTGATA GCTCACGATG TAAGGTTGAA
GGAATTAAGC TGTCTGATGA AGGTTTGAGC AAGGCACCTA TTACCAGCCG CTATCCCAAG
GAAATGTATT ACCGGATTTT TGCAGTGAAT TATCTTCCCG ATCACCTTGA ACGAATTTTG
TACCTGGATC CTGATCTTGT CGTCATCAAT CCTCTAAAGG AGCTCTACAC CATAGACTTC
CAAGGAAACT TCTTCGCAGC AGCCTCCCAT GTTAAGGAAC TATTGAAAAA ACTCAATCAC
GTCAGACTTA ATATGGCTGA AGACAGCACC TATGTCAATT CGGGGGTGAT GATGATGAAC
TTGTCCCTGC TGCGCCAGGA ACAGGATGTT CATGAAGTCT ACCAATATAT TGAAGAATAC
AAGCACCGCT TATTCCTGCC TGACCAGGAT GTTCTTAATG GGGTGTATAG TGATAGAACC
CTGACTGTAG ATGCGAAAAT CTATAATCTC AGTGAGCGGT ATTATGCCCT CTATAATCTG
AACCCCAAGT ACTGGGATGC TAAAATTGAT CTGGATTGGG TCCGCAGCAA TACAGCGATT
ATTCACTATT GCGGCCGCAA CAAACCCTGG AAAGACAACT ATATTGGGGA TTTGAACGTT
TTTTATAAAA ACTATGAGCA AAAGGTTCGT GCCAAAATGA AGGATTTTGA AACTATGAGG
TGA
 
Protein sequence
MNILVTLNSS YVKQLMVMLT SLLDSNPGEQ FTVYVAHSAM SKEDFARIDQ AIDSSRCKVE 
GIKLSDEGLS KAPITSRYPK EMYYRIFAVN YLPDHLERIL YLDPDLVVIN PLKELYTIDF
QGNFFAAASH VKELLKKLNH VRLNMAEDST YVNSGVMMMN LSLLRQEQDV HEVYQYIEEY
KHRLFLPDQD VLNGVYSDRT LTVDAKIYNL SERYYALYNL NPKYWDAKID LDWVRSNTAI
IHYCGRNKPW KDNYIGDLNV FYKNYEQKVR AKMKDFETMR