Gene Dhaf_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1235 
Symbol 
ID7258205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1329722 
End bp1330552 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content48% 
IMG OID643561148 
ProductS-adenosylmethionine decarboxylase 
Protein accessionYP_002457728 
Protein GI219667293 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1586] S-adenosylmethionine decarboxylase 
TIGRFAM ID[TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000212775 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGTAA AACCGCTCAA AAAGCTGAGG CTCTACGGGT TCAATAATCT TACCAAAACC 
CTGAGTTTCA ATATGTATGA TATATGTTAT GCCAAAACTC CGGAGCATCG GGATGCGTAT
ATACAATACA TCGACGAAGA GTACAACGCG CAAAGACTGA CCAGCATTGT CACTGAGGTC
GCCCGGATCG TGGGGGCCAA CATTTTAAAT ATTGCCAAGC AGGATTACGA TCCCCAGGGA
GCCAGTGTCA CCATGCTCAT CGCCGAAGAG CATTTAGGCC CGGAGAACCC GGACAATGAT
CCCTTTAGCC CCGTGTATAC CGACAAAGAA GGGCCTCTCC CCGATGCAGT GGTTGCCCAC
TTGGATAAAA GCCATATCAC CGTGCACACC TATCCGGAAA GCCATCCCCA CGGCGGGATT
TCCACCTTCC GGGCGGATAT CGATGTCTCC ACCTGCGGGC AGATTTCTCC TTTGAAGGCA
CTTAACTTCC TGATCGAAAG CTTCGCCCCG GATATCATCG TCGCCGATTA TCGTGTCCGC
GGTTTTACCC GGGATGTGGA TGGCAAAAAA GTCTTCATTG ACCATAAGAT CAATTCGATC
CAAAACTATG TCGATCGGAA ATACCGGGAT CTCTATCAGA TGATCGATGT TACCGTCTTC
CAGGAATATA TCTTCCACAC CAAGATGATC CTTAAAGACT TCGACCTGGA TAATTATCTC
TTTGGCACCG CCAAAAAGGA ACTGTCCATC AATGACAAAC GTAAAATCAA ACAACGGCTG
AAGAAGGAAA TGGCCGAGAT TTTCTACGGA AAGAATATGC CGAGAATCTA G
 
Protein sequence
MEVKPLKKLR LYGFNNLTKT LSFNMYDICY AKTPEHRDAY IQYIDEEYNA QRLTSIVTEV 
ARIVGANILN IAKQDYDPQG ASVTMLIAEE HLGPENPDND PFSPVYTDKE GPLPDAVVAH
LDKSHITVHT YPESHPHGGI STFRADIDVS TCGQISPLKA LNFLIESFAP DIIVADYRVR
GFTRDVDGKK VFIDHKINSI QNYVDRKYRD LYQMIDVTVF QEYIFHTKMI LKDFDLDNYL
FGTAKKELSI NDKRKIKQRL KKEMAEIFYG KNMPRI