Gene Dhaf_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1203 
Symbol 
ID7258173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1299063 
End bp1300052 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content38% 
IMG OID643561117 
Productphosphonate ABC transporter, periplasmic phosphonate-binding protein 
Protein accessionYP_002457697 
Protein GI219667262 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGTATTG ATGAAATGAA ATTTATGAAT CCACAGAATC ATGGCCAGTG CTTTTTACGT 
TTTTTGCTAC TAATCATTCT TTCTTTTTCA ATGCTTACAG GCTGCAGTAG CCAAGGAGAA
GAGGCTATCG ATATTGATTT AGCCAACCGT TCTTATAATG AAGCCCGATC TAATTCCCCC
GAAATATCCG ATGCTATTTA TTTTGGCTTT GACAGAAGAT TAGAGACTAA AGAAGATGTA
AAGATGTATG TTCCACTATT AAATTACTTA AGAAAAGAAA CTGGATATCG ATTTGAGATC
CATGTTACTC CTGTCAACTC AAGTGTTGTT GAGGAGTTAG GACAAGGAAA AATTCAAATG
GCAGCAATTG GAACACTAGG GTATTTACAA GCTTCTGAAA CTTTTGGTGC AATTATTACC
GTTAAAGGAC TTAATAATGA AGACAAGGAT ATGTATAAAG CTGCGATTGT GACCCGTCCT
AATAGTCAAA TAAAGGTGAT ATCAGACATA AGGGGGAGAT CTTTTGCTTT CGGCGATCTT
GCATCTACCC AAGGACACTT AATACCGAGA ATCATGTTAT CGCAAAAGGG GATAGAAATT
ATTTCGCTTA AGTATTATCA AAATTTCGCC TCTCATTCTG AAGTCGCAAA TGCAGTTATG
AGTGGCCGAT TTGAAGCTGG CGGTATGCAA GATACATTGG CAAAATCTCT TGAGGACGCC
GGTTTATTGA AAATTATCGC TGTTTCAGAG GAATATCCAA GTAGTGGTAT CGCTTTTGCT
AAAGGAGTAG ATAAAGATGT TATTGATAAA ATTACTCAGG CATTAGTAAA GTTCGATCCC
GAAGGGGAAG ATAAGGCAGG CCTTTACCAT TGGGAAAGGT CTGAAATGCC ACATGGTTTC
ACCTATGCCA ACAATGAGGA CTATAACGTA TTAAGAAACT GGGCCGATAA ATTTGGTTTA
TTAAAAAAAA TGGATGGTGA AAGCAAGTGA
 
Protein sequence
MGIDEMKFMN PQNHGQCFLR FLLLIILSFS MLTGCSSQGE EAIDIDLANR SYNEARSNSP 
EISDAIYFGF DRRLETKEDV KMYVPLLNYL RKETGYRFEI HVTPVNSSVV EELGQGKIQM
AAIGTLGYLQ ASETFGAIIT VKGLNNEDKD MYKAAIVTRP NSQIKVISDI RGRSFAFGDL
ASTQGHLIPR IMLSQKGIEI ISLKYYQNFA SHSEVANAVM SGRFEAGGMQ DTLAKSLEDA
GLLKIIAVSE EYPSSGIAFA KGVDKDVIDK ITQALVKFDP EGEDKAGLYH WERSEMPHGF
TYANNEDYNV LRNWADKFGL LKKMDGESK