| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1182 |
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| Symbol | |
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| ID | 7258152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1278731 |
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| End bp | 1280398 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643561096 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_002457676 |
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| Protein GI | 219667241 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000261051 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGATTA CAGTCAAAGA TCTGCTGAAG GTGGGACCTC TGAAGACCTC TCAAGTGGTT
GCAGGTTATC AGAAGCTTGA TAATATAGTC AAAGGTGTTA CCATCATCGA AGCGCCGGAT
ATTGTCAACT GGTTATCGGG AGGGGAGCTT CTGCTCACCA GCCTATACTC AGGTCCGGGT
GAAGGGATGG ACTATCGGGA ATTTATTCAT AAAATGGCCA CGAAAGAGGT TTCAGCCTTG
GCTATAAAAG TACGGCGGTT TGTCAACGAT ATTCCGCCTG AAATTATTGA GGCGGCCAAT
GAGTATGGGC TGCCCGTGAT TGAAGTGGAT GGCAGTGTCC GTTTTGTGGA TATTATGTAT
CCGGTGATGG AGCAGCTCTT TAACTCCCAG GTAGTGAAGC TCAAGTATTA TAAAGATGTT
CAGGAGCGGT TTACAACCTT AGCTTTGCAA TGTGAGGGCT TAGCGGTCAT CTGCCAAACC
CTGGAAGAGT TGGTCGGCAA TCCGGTGGTG GTCTATGATA AGAATTTTAA ATGCCTGCAG
AGCACCAATC CTCAAATAGA GCGATTTGAG GAACCTGAAG AATTTGCCTT AAGGGAGAAC
CTGAACGACA AATTTTCCTA TTACCGGCAA TCCGTATGCT ACCCTGATCT TGACGGACGC
TGTATTCCCC AGGTCGTCGT TCCTATTCAG GCTTTTAATC AGCTCAAGGG ATATTTAACC
ATAGTGGAGT TGAATAAGCC TATTGTAGAG ATGGATTTTA TTAGTATTGA ACAGGCCGCT
ACGGTGACCA CCCTGGATAT GGTGAAGCGT TTTGCTGTTA AAGAAGTGGA GTATAAATTC
AAGAATGATC TGATTGAGCA CATCCTTTCC GGGGAGCTGA GCTCAACCAA TGCCCAGGAG
CGCATCAATC TCATGGAGTG GGATCTTAAT CGCCCTTACT ATGTGGTTCT TTTTGATTTG
AAGAATCTTG ACGCTTATCA TGTGGAGCAT CGCACCCAGC AAAAGATGGC TTTGCAAAGC
ATTAAATCGG AAATTACCTC AACCATTTCG GGAGTCATAA AAACCCGCAC CCGGGACTTC
ATTATCGGCA ATAAAGTGGA TATTATTGTA CTGCTTTGGC CGGTTGCAGC TAATCCTCAG
GAGAATTCCC TGGAGAAAAT CAAAAAGATT GCCAAGCAGG CTCAAGAGCA GGTCAAAAAG
CGGATGAAGA AGCTGATCGT GGAAGTGGGA ATCGGCGATT TAGCTCACGG AGCGGAGGAA
ATCCCCCGCA GTTACAAAGA GGCTTTGGAT GCTTTGAGCT ATGGCGGCAT GATCAGCAAT
GAGAGCGCCA TTGTGGCTTT TTCGGAGTTA GGGGTGTTCC GTATTCTCTG TAAATTTGCC
GAGCGGAACT CCCTGGAAGA ATTCATTCCC AAGGCTCTGC TGAGGATTCT CAGATATGAT
AAGGACAATG AAGCTGAGCT ACTGAAAACT CTGGAAGTAT TTCTGGAATG CAACGGAAAT
GCCAGCAGGG CTGCCAAAGA ACTGTTTATC CACTATAAAA CCATCCTCTA TCGCTTGGAG
AGGATCAAGG AAGTCGGCCA ATTGGATTTG GAAGATAGTA AAAATCGCCT TGAGCTGGAG
ATGGGCTTGA AGATGCTTCA TCTTATGGAT GCCTCTAATC TGGGATAG
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| Protein sequence | MEITVKDLLK VGPLKTSQVV AGYQKLDNIV KGVTIIEAPD IVNWLSGGEL LLTSLYSGPG
EGMDYREFIH KMATKEVSAL AIKVRRFVND IPPEIIEAAN EYGLPVIEVD GSVRFVDIMY
PVMEQLFNSQ VVKLKYYKDV QERFTTLALQ CEGLAVICQT LEELVGNPVV VYDKNFKCLQ
STNPQIERFE EPEEFALREN LNDKFSYYRQ SVCYPDLDGR CIPQVVVPIQ AFNQLKGYLT
IVELNKPIVE MDFISIEQAA TVTTLDMVKR FAVKEVEYKF KNDLIEHILS GELSSTNAQE
RINLMEWDLN RPYYVVLFDL KNLDAYHVEH RTQQKMALQS IKSEITSTIS GVIKTRTRDF
IIGNKVDIIV LLWPVAANPQ ENSLEKIKKI AKQAQEQVKK RMKKLIVEVG IGDLAHGAEE
IPRSYKEALD ALSYGGMISN ESAIVAFSEL GVFRILCKFA ERNSLEEFIP KALLRILRYD
KDNEAELLKT LEVFLECNGN ASRAAKELFI HYKTILYRLE RIKEVGQLDL EDSKNRLELE
MGLKMLHLMD ASNLG
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