Gene Dhaf_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1114 
Symbol 
ID7258083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1206839 
End bp1208086 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content49% 
IMG OID643561029 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002457610 
Protein GI219667175 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCTGA ATAACAAGCC GGAGTGGAAG AAGAATACGA TACTCTTTTT AACCAGCCAG 
ACTATATCCC TCTTTGGTTC ATCCTTAGTT CAATATGCCA TTATGTGGTA TATCACCTTA
GAGACTCAGT CAGGAATTAT GATGACGATC TCCATTATCT GCGGTTTTCT GCCCACTTTC
TTTCTCTCAC CTTTTGCGGG AGTATGGGCT GATCGCTATA ACCGTAAACG GCTGATTATA
CTGGCAGATT CCATGATCGC CATATCTACT TTGATTCTGG CTCTGCTGTT TTTCGCCGGA
TACAAAATGA TGTGGCTGCT CTTTGTGATG TCCGCTATCC GTGCTCTTGG CGCAGCGGTG
CAAATGCCGG CGGTGGGGGC ATTTATCCCT CAGCTGGTGC CGGAGGATAA GCTGCTCAGG
GTAAATGGCA TAAACGGAAG CATCCAATCC GCCGTAATGC TGGTATCACC GATGTTAAGC
GGGGCCCTGC TGACCTTTAC CACCATTGAA GCGATTTTCT TCATCGATGT TATTACAGCG
GCTCTGGGTG TCTCGGTTTT GTTGTTCTTT TTACATGTGC CCGCCCACCG TAAAGCACAG
GAAGCGCAAA CAGTCAGCTA TTTTGCCGAT ATGAGCCAGG GGCTGAAGTA TATCAGGGAA
CATGCTTTTC TAAAAAGTTT CTTCGTCTTT TGTGCTTTGT TCATGATTAT GGCGGCACCG
GCGGCTTTTC TGACACCTCT TCAAGTCGCC CGGACCTTTG GGGATGATGT ATGGCGTCTT
ACCGCCATTG AAATGACTTT CTCTGTCGGC ATGATGATCG GTGGCATTCT GATGGCAACC
TGGGGTGGCT TTAAGAACAG GATTCATTCC ATGGCCTTAG GAACCCTTGG CTTTGGAGTC
TGTACCGTTG CGCTGGGAGT CATTCCTGTT TTCTGGCTCT ACCTGGTTTT CATGGCTTTC
GTAGGGGTGT CTATGCCGAT TTTTAATACT CCTGCAACGG TAATGCTTCA GGAAAAGGTG
GAACCCGATT TTCTGGGCCG GGTTTTCGGG ATTCTCTCCA TGATCTCCAG CACCATGATG
CCCCTGGGGA TGCTCATTTT TGGCCCGCTG GCGGATAGTA TAGCCATCGA AGTGCTGCTG
ATCGGAACCG GCGTGATCAT GGTCCTGGAG AGCGTTTTCC TTTTTGGCAA TAAGGTGCTC
CTTGAAGCCG GCCGGCCGGC GGTTAAGCCT ATAGAACCCG TGAACTAG
 
Protein sequence
MVLNNKPEWK KNTILFLTSQ TISLFGSSLV QYAIMWYITL ETQSGIMMTI SIICGFLPTF 
FLSPFAGVWA DRYNRKRLII LADSMIAIST LILALLFFAG YKMMWLLFVM SAIRALGAAV
QMPAVGAFIP QLVPEDKLLR VNGINGSIQS AVMLVSPMLS GALLTFTTIE AIFFIDVITA
ALGVSVLLFF LHVPAHRKAQ EAQTVSYFAD MSQGLKYIRE HAFLKSFFVF CALFMIMAAP
AAFLTPLQVA RTFGDDVWRL TAIEMTFSVG MMIGGILMAT WGGFKNRIHS MALGTLGFGV
CTVALGVIPV FWLYLVFMAF VGVSMPIFNT PATVMLQEKV EPDFLGRVFG ILSMISSTMM
PLGMLIFGPL ADSIAIEVLL IGTGVIMVLE SVFLFGNKVL LEAGRPAVKP IEPVN