Gene Dhaf_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1107 
Symbol 
ID7258076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp1197800 
End bp1198432 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content46% 
IMG OID643561022 
Productcobalamin B12-binding domain protein 
Protein accessionYP_002457603 
Protein GI219667168 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAG TAAATGAAGT CAAAATATCG GTGGAGATGG GAAAAACCAA AATTGTTCCG 
GGGCTGGTAC AAGCAGCATT GGATGAAGGA AATACTGCGA AAGAACTTCT TCAGGCAATG 
GTTGATTCAA TGAGTGTGGT TGGGGACAAA TTTTCCGCCG GAGAAATTTA TGTGCCGGAA 
ATGCTGCTGG CCGCCAAAGC AATGGCCAAA GGCGTTGAGG TTCTAAAGCC GCATCTGACA 
GGTGATGCAT CAGCTTCTTT GGGTACTTGT GTTATCGGGA CGGTAGCAGG AGATCTTCAT 
GATATCGGGA AAAATCTGGT TGGCATGATG ATAGAAAGCG CAGGATTTGA TATGGTTGAT 
CTTGGTGTAG ATGTCCCTGC TTCTAAATGG GTAGAGGCAA TTAAAGAAAA TGGGAACGTA 
ACTTTAGTGG CTTGTTCAGG ACTTCTTACG ACAACTATGC CCGCTCTGAA GGAAGCAGTT 
CAAACCATCA AAGAGAGCGG ACTTACCGGA TTTAAGATTA TTGTCGGTGG GGCTCCTGTA 
ACGCAGGCGT ATGCTAATGA AATCGGTGCC GACGGCTATG CTGGGGATGC AGGCAGCGCA 
GCAATCAAAG CAAAGGAATT AGTCAACGTG TAA
 
Protein sequence
MAKVNEVKIS VEMGKTKIVP GLVQAALDEG NTAKELLQAM VDSMSVVGDK FSAGEIYVPE 
MLLAAKAMAK GVEVLKPHLT GDASASLGTC VIGTVAGDLH DIGKNLVGMM IESAGFDMVD 
LGVDVPASKW VEAIKENGNV TLVACSGLLT TTMPALKEAV QTIKESGLTG FKIIVGGAPV 
TQAYANEIGA DGYAGDAGSA AIKAKELVNV