| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1089 |
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| Symbol | |
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| ID | 7258058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1181250 |
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| End bp | 1182530 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643561004 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_002457585 |
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| Protein GI | 219667150 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000284177 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAAA GAACGATAGC AATATTCGTA ATCATTATTG CCGCTTTGGT TTTAGGATTT
CTCTTTTTAT CCCAAAGGTT GAATCCCCAG GAGGGTAACC TTTCCATACC AGGTCAACAC
GATCAGCAGG GGAACAATAA TCCGGCTGAA CCCTCAGAAA AGCCCCCCGA GATTGACCCC
CTGCAGGAAC GGATCCAAGC TATGACCTTG GAAGAGAAGG TCGGGCAGCT GGTGATGGTG
GGAGTGGACG GGTATGAAAT AAACGCTAAT GCTCAGCAGT TGATTGAAAA TTATCATGTG
GGCGGCTTTG TTCTCTTAAA GAAAAATGTC AGGGATAGCG GGCAGATGTT AAACCTGATC
AACACCTTGA AAGAGACCAA TGGAGTCAAT AGAATTCCCT TATTCCTGGC CCTTGATGAA
GAGGGGGGCA GGATATCCAG GATGCCTGCT GAATTCAAGA AGATGCCTTC CAGTCAGCAG
GTCGGAGCCC AGAATAGTGG TGCTTTAGGG AAGAAGATGG GAGAAATCCT GGGCCGGGAA
GTCAAGGGAT TTGGGATGAA TGTGAATTTC GCTCCGGTTC TCGATATTTT CAGCAACCCC
AAGAATAAAG TGATCGGTGA TCGTGCTTTC GGCAGCAACC CCGAGCTTGT CAGCAAAGTG
GGAATTCAGA CTATGAGGGG AATCCAGGAG CAGGGCATTA TCTCTGTGGT TAAACATTTT
CCCGGTCATG GGGATACTTC GGTGGATTCC CATGTGGGAT TGCCCCGCGT TGATTATGAT
CTGGAACGAT TAAGGAATTT TGAGCTGAGG CCATTTGCAG AAGCCATTGC CAATGATGTG
GATGCCATTA TGCTGGCCCA CATCCTGCTG CCGAAGCTTG ACCCGGATTA TCCGGCATCC
TTTTCAGAAG TTCTTATCCG CGATATCCTG CGCAAAGAGA TGGACTATAA CGGGGTCGTG
ATTACGGATG ATATGACTAT GGGGGCTATT GTGGAGAATT ATAATATCGG TGAGGCCGCG
GTGAAATCCA TCCTGGCCGG CAGCGATATT GTCCTGGTCT GCCATGATTT CGCGAAAGAA
GAGGCTGTTC TCAAGGAGAT CCTTCATGCT GCAGAGACAG GGAAAATTCC CGTGGACCGG
ATCGATGAAA GTGTTTATCG TGTCTTAAAG CTGAAAGAGA AGTATGCTCT GGCCGACCGG
CAGAAAGAAT CGGTGGATGT ACAAGGTATC AATGCCGAAA TCGAGCAGTT TTATAAGGAT
TACCCGGCTT TAAAAGGGTA G
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| Protein sequence | MGKRTIAIFV IIIAALVLGF LFLSQRLNPQ EGNLSIPGQH DQQGNNNPAE PSEKPPEIDP
LQERIQAMTL EEKVGQLVMV GVDGYEINAN AQQLIENYHV GGFVLLKKNV RDSGQMLNLI
NTLKETNGVN RIPLFLALDE EGGRISRMPA EFKKMPSSQQ VGAQNSGALG KKMGEILGRE
VKGFGMNVNF APVLDIFSNP KNKVIGDRAF GSNPELVSKV GIQTMRGIQE QGIISVVKHF
PGHGDTSVDS HVGLPRVDYD LERLRNFELR PFAEAIANDV DAIMLAHILL PKLDPDYPAS
FSEVLIRDIL RKEMDYNGVV ITDDMTMGAI VENYNIGEAA VKSILAGSDI VLVCHDFAKE
EAVLKEILHA AETGKIPVDR IDESVYRVLK LKEKYALADR QKESVDVQGI NAEIEQFYKD
YPALKG
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