Gene Dhaf_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1081 
Symbol 
ID7258050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1174320 
End bp1175354 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content48% 
IMG OID643560996 
ProductThreonine aldolase 
Protein accessionYP_002457577 
Protein GI219667142 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00175946 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGTT TTAAAAACGA CTATAGCGAA GGTGCTCATC CGCAAATTCT GGAGGCTTTG 
CTGACATCGA ATTATGTCCA GGAGAGTGGA TATGGTGAAG ACAGCTATTG CCAAGCGGCC
GCAGAGATTC TCCGTAAAAA ACTGGGGAAC AATGCAGTAG ATATTCACTT TCTGGCTGGA
GGCACGCAAA CCAATCTGAT CGCGATTGCC GCTTTTTTGA GACCTCATGA GGCTGCTATC
GCGGCTCATA CCGGCCATAT TTTTGTCCAT GAGACGGGAG CCATCGAGGC CACCGGTCAT
AAGGTTCTGA CAGCCGAGGT GAAGGATGGC AAGTTAACCC CTGCTCACGT GGAAGAAATC
CTCAATGCTC ATACCGATGA ACATATGGTG AAGCCTAAGC TGGTCTATAT CTCCAACGCC
ACGGAAGTAG GAACGATTTA CACTAAAAAG GAGCTTAGGC TTCTCAGTGA ATTTTGCCGG
GAGAAGAAGC TCTACCTCTT TATGGATGGA GCAAGACTCG GTTCAGCTTT GTGCTCTGCC
GGAAATGATT TGACGTTATC CGAATTGCCC GACTTGGTAG ATGCCTTTTA TATCGGCGGG
ACAAAAAACG GGGCACTGCT GGGGGAAGCC TTGGTGCTGT GCAATGAGGA ATTAAAACAG
GATTTTCGCT ATCATATGAA GCAAAAGGGT GCCCTTTTAG CCAAAGGAAG GGTCCTGGGG
ATTCAATTCC TGGAGCTGTT CCGCGATAAT CTGTATTTTG ACTTGGCGAC CCACGCCAAT
AGTATGGCGT ATAAGCTGCG GGATGGTTTA AAAGAAGCGG GGGTCAGCTT TCTTTCGGAA
TCCCCCTCCA ATCAGATTTT CCCCATTTTC GCCAACGAAG TAGTACAAGA GTTGAAAGAG
AGTTATCATT TTGAAATTTG GGGCAAAGTA GATGAGAGGC ACACTGCTAT TCGTTTGGTG
ACATCCTGGG CGACAAAGGA GGAAGCGGTG ACTGCCTTTG TCAAGGATAT CCGTCGGATT
CTTCAACCCC AATGA
 
Protein sequence
MISFKNDYSE GAHPQILEAL LTSNYVQESG YGEDSYCQAA AEILRKKLGN NAVDIHFLAG 
GTQTNLIAIA AFLRPHEAAI AAHTGHIFVH ETGAIEATGH KVLTAEVKDG KLTPAHVEEI
LNAHTDEHMV KPKLVYISNA TEVGTIYTKK ELRLLSEFCR EKKLYLFMDG ARLGSALCSA
GNDLTLSELP DLVDAFYIGG TKNGALLGEA LVLCNEELKQ DFRYHMKQKG ALLAKGRVLG
IQFLELFRDN LYFDLATHAN SMAYKLRDGL KEAGVSFLSE SPSNQIFPIF ANEVVQELKE
SYHFEIWGKV DERHTAIRLV TSWATKEEAV TAFVKDIRRI LQPQ