| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1079 |
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| Symbol | |
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| ID | 7258048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1172292 |
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| End bp | 1173506 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643560994 |
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| Product | threonine dehydratase |
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| Protein accession | YP_002457575 |
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| Protein GI | 219667140 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR01127] threonine dehydratase, medium form |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000539723 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTACAC TACTGACTTT AGAACAGATC CAAGAAGCAC AACAAGCTAT TCAGCCCTAT
ATTCACCGGA CACTTCTGGA TCATTCAAGC AATTTGAGCG CCCTGGCTGG GACGGAGATC
TACCTCAAGC TGGAAAATCT GCAGAAGACC GGTTCCTTTA AAGTTCGGGG GGCTATGAAT
AAAGCCTTGA AGCTTTCTGA AGAGGAGAAG AAAAAAGGAA TCCTGGCCGC TTCCGCCGGC
AATCATGCCC AAGGGGTAGC CATGGCGGCT GCCCGTATCG GTATTCCCGC CACGATTGTC
ATGCCGGAAA ATGCCCCCCT AGCCAAAGTG TCCGCTACGG AAGGGTACGG AGCCCAGGTC
ATTCTGTCCG GAGCGGTTTT TGATGATGCT TATCAGAAGG CAGTAGAGAT CCAAAAGGAA
ACAGGAGCCA CGTTTATCCA TGCTTTTGAT GATCTGGAAG TTATGGCCGG GCAGGGAACC
ATCGGCTTGG AAGTTTTTGA GGAGCTGCCT GAAGTGGATA CGGTTCTTGT CCCTATCGGG
GGAGGAGGGC TGATCGCAGG GATTGCTGTG GCTTTGAAAT CCCTGAAGCC TTCCGTGCGC
GTGATCGGTG TCCAAGCGGC CGGAGCGGCA AGCATGGCTC ACGCGCTGAG CATAGGCAGG
CCCGAGCCAT TAGGGCAGGC CAGTACTTTG GCAGATGGCA TTGCGGTGAA AAGGGCAGGT
GATCTAACCT TCGCAGCAGT CCGCCATTAT GTGGATGAGA TGGTGACGGT TGAAGAAGAA
GAGATTAGTC AAGCTATTCT CCTGTTGATG GAGCGCACCA AAACCCTTGC TGAAGGAGCC
GGGGCGGTTG CCGTAGCGGC GGCGCTTCAG GGTAAGCTGG ATCTTAAGGA GCAGAAAACG
GTTCTCATCC TGAGCGGGGG AAATATTGAC GTGAATTTCC TGGCCCAGAT TATCGAACGG
GGACTGAGGC GTTCCGGGCG TACCATGGCC TGCCAGCTTC TTTTGCCGGA TCAACCCGGC
AACTTAGAAA AGGTGATCGA GCTTATAGCC CAGGAACGGG CCAATATCAT CAACGTCGAA
CACTCCCGCT ATGATTTAGC CGTTCCTCTG CGTTCAGCCC GTGTTCATAT GCTGCTGGAA
ACCCAAAGTT TTGAACATCA AAAGCGCATT ATTCAGCGTT TAGAAGGTGC CGGATATCCC
CTGACCGTTA ACTGA
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| Protein sequence | MPTLLTLEQI QEAQQAIQPY IHRTLLDHSS NLSALAGTEI YLKLENLQKT GSFKVRGAMN
KALKLSEEEK KKGILAASAG NHAQGVAMAA ARIGIPATIV MPENAPLAKV SATEGYGAQV
ILSGAVFDDA YQKAVEIQKE TGATFIHAFD DLEVMAGQGT IGLEVFEELP EVDTVLVPIG
GGGLIAGIAV ALKSLKPSVR VIGVQAAGAA SMAHALSIGR PEPLGQASTL ADGIAVKRAG
DLTFAAVRHY VDEMVTVEEE EISQAILLLM ERTKTLAEGA GAVAVAAALQ GKLDLKEQKT
VLILSGGNID VNFLAQIIER GLRRSGRTMA CQLLLPDQPG NLEKVIELIA QERANIINVE
HSRYDLAVPL RSARVHMLLE TQSFEHQKRI IQRLEGAGYP LTVN
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