| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1077 |
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| Symbol | |
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| ID | 7258046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1170577 |
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| End bp | 1171452 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643560992 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_002457573 |
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| Protein GI | 219667138 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000027339 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATCGTA AACGATATGA ATTGAACAAA GAGCTGGCTC AGATGTTAAA GGGCGGCGTA
ATTATGGATG TGACCACTCC GGAGCAGGCC AAGATTGCGG AAGCGGCCGG CGCCTGTGCG
GTGATGGCAC TGGAAAGGAT TCCGGCGGAT ATCCGGGCGG TCGGCGGAGT TTCCCGCATG
AGCGATCCGA AAATGATTAA AGGAATCATG GAAGCCGTCT CCATTCCTGT GATGGCGAAA
TGCCGCATTG GTCATTTCGT GGAGGCTCAA ATTTTGGAGG CTGTTGAAAT CGATTATATC
GATGAGAGTG AAGTGCTTTC CCCGGCTGAT GATGTCTATC ACATCGATAA GACCAGATTC
AAAGTGCCTT TCGTCTGTGG AGCGAAGGAT TTAGGGGAGG CTTTGCGCCG CATCAATGAA
GGGGCTGCCA TGATTCGTAC TAAAGGGGAA CCGGGTACCG GGGATATTGT TCAAGCAGTG
CGCCATATGC GCATGATCAA TCGTCAAATC AGCCGCCTTG CCGGTATGCG GGAAGACGAG
CTGTTCCAGG AGGCTAAAGA GCTGCAGGTT CCCTATGATT TAGTGCTTTA TGTTCATGAA
CACAAACGCC TGCCGGTGGT CAACTTCGCC GCCGGTGGCG TGGCAACTCC CGGGGATGCG
GCCCTGATGA TGCAGCTGGG GGCTGAAGGA GTATTTGTGG GCTCCGGCAT CTTTAAATCG
GGAGATCCGG AAAAAAGAGC CCAAGCCATC GTCAAAGCTG TGACCAATTA CCAGGATCCC
AAGGTGTTGG CAGAGCTTTC CGAGGATCTG GGTGAAGCCA TGGTAGGGAT TAACGAACAG
GAAATCGAGC TGCTGATGGC AGAGCGGGGC AAGTAA
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| Protein sequence | MDRKRYELNK ELAQMLKGGV IMDVTTPEQA KIAEAAGACA VMALERIPAD IRAVGGVSRM
SDPKMIKGIM EAVSIPVMAK CRIGHFVEAQ ILEAVEIDYI DESEVLSPAD DVYHIDKTRF
KVPFVCGAKD LGEALRRINE GAAMIRTKGE PGTGDIVQAV RHMRMINRQI SRLAGMREDE
LFQEAKELQV PYDLVLYVHE HKRLPVVNFA AGGVATPGDA ALMMQLGAEG VFVGSGIFKS
GDPEKRAQAI VKAVTNYQDP KVLAELSEDL GEAMVGINEQ EIELLMAERG K
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