Gene Dhaf_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1021 
Symbol 
ID7257989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1113986 
End bp1115137 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content51% 
IMG OID643560935 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_002457517 
Protein GI219667082 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA GACTGACAGA AGAACAGGAA TTACTTCTCG AAAGCCTCAG AGAAGTCATG 
GCCAGGGATT GTACCGAAGA CTATATGAAA GAATGCTACG AAAAAGGCGA GCATCCCACA
AAGTTCGTTC AGGCCCTTAT GGATAATGGC TTTGGCATGT TAGGGGTTCC GGAAGAACAC
GGCGGCACCC CGGTGGATAA CTTGACCATG ATGCTGGTCG CTGAAGAAAT CACCAAGAAC
GGCGGTCCTC ACTTCGTGTT CGGACAGGCA TTATCCATTG CCGATATGCT CCACTTTGGT
TCCGAGGAGC AAATCGCCGA TACCATGGCT GTGGTGCAAA GGGGCGGAGT TGCCTTCGTC
CTGGGATTTA CAGAGCCTCA AGCCGGTTCC GACAGCAGTG CCGCCGCCAC CACCTATACC
CGCAGAAATG GCAAGGTCTA TATCAACGGT CACAAAACCT TCATGAGCGG AGCGCTGCGG
GCACCCTATA TGCTCTGCCT GGCCCGCAAT TCGGAAGAGG CCGGCAATGC CGACAAACGC
AACGCCTTCA GCATGTGGTG GGTGCCTATG AATGCTCCCG GCATTAAGAT CGAAAAGCTG
GAAAAGATCG GCTGGCATAT GCAGGATACT TGTGAAGTTT ACCTAGAAGA TGTGGAAGTC
GAAGAAAAGG ATCTCGTCGG TGTGGAAGGC AACGGCTTTA TGCAAGTCTT GTACAACTTT
GAGATGGAAC GCTTGTTGAT GGCGGCCTCG GTGCTGGGCA TGGCGGAGTG CGCTTTTGAA
GATGCCGTCC GTTACGCCAA CCAACGGGTG CAGTTTGGCA AGACCATTGG CTCCTTCCAG
CTGATTCAGG AAAAAATCAC CTTTATGAAA GCCAAAATCG AGAATATGAA AAATATGGTC
TACAAATGCG CCTGGGAAGT GGACAACGGG CTGCCGGTGC AAATCTCTTC GGCGATTGCC
AAATTATATT GTGCACAAGC GGCCAATGAA GTCATTGATG ATGCCCTGCA AATCATGGGC
GGAATCGGTT ACACCAAAGA TGCCCGTATC TCCAGGTTAT GGCTGGATGC CCGGGTCTTC
AGGATCGGCG GCGGTACGGA CGAAATCATG ATTCACGCCG CGGGAAGAGC CATTTTAAAG
CACTATAAAT AA
 
Protein sequence
MDFRLTEEQE LLLESLREVM ARDCTEDYMK ECYEKGEHPT KFVQALMDNG FGMLGVPEEH 
GGTPVDNLTM MLVAEEITKN GGPHFVFGQA LSIADMLHFG SEEQIADTMA VVQRGGVAFV
LGFTEPQAGS DSSAAATTYT RRNGKVYING HKTFMSGALR APYMLCLARN SEEAGNADKR
NAFSMWWVPM NAPGIKIEKL EKIGWHMQDT CEVYLEDVEV EEKDLVGVEG NGFMQVLYNF
EMERLLMAAS VLGMAECAFE DAVRYANQRV QFGKTIGSFQ LIQEKITFMK AKIENMKNMV
YKCAWEVDNG LPVQISSAIA KLYCAQAANE VIDDALQIMG GIGYTKDARI SRLWLDARVF
RIGGGTDEIM IHAAGRAILK HYK