Gene Dhaf_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0990 
Symbol 
ID7257958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1075696 
End bp1076217 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content41% 
IMG OID643560904 
ProductNUDIX hydrolase 
Protein accessionYP_002457486 
Protein GI219667051 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000363849 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAC TATGGGATAT CTACGATAAA AACAGAACTT TAACCGGGAG AACAATGGAA 
CGGGGAAGCC AATTTGCTAA AGGCGATTAT CATCTGGTTA TTCATGTTTG TATCTTCAAC
TCAAAAAACG AACTGTTGAT TCAAAAACGG CAACCCTGGA AAAAGGGATG GCCTAATATG
TGGGATATCA CTGTCGGGGG AAGTGCTTTG GCCGGTGAAA CCAGTGCGGA AGCCGCCGAA
AGAGAAACCT TTGAAGAAAT AGGCTATAAA ATTGATTTGT CCGCTGAACG CCCATTTTTC
ACCGTGAATT TTGAAAGAGG CTTTGATGAC TATTACCTCG TTGAGAGAGA TATCGACATC
AATGGCTTAT GCTTGCAATA TGAAGAAGTT CAATGTGTGA AATGGGCAAG TAAGGATGAA
ATCATGCAGC TTATTGAAGA AGGTCAATTC ATTGGTTATT GGTTTATGGA ACAGCTTTTT
GACATTCGGA AACACAGAGC CGGATATCGC TTTACGGGAT GA
 
Protein sequence
MTELWDIYDK NRTLTGRTME RGSQFAKGDY HLVIHVCIFN SKNELLIQKR QPWKKGWPNM 
WDITVGGSAL AGETSAEAAE RETFEEIGYK IDLSAERPFF TVNFERGFDD YYLVERDIDI
NGLCLQYEEV QCVKWASKDE IMQLIEEGQF IGYWFMEQLF DIRKHRAGYR FTG