Gene Dhaf_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0878 
Symbol 
ID7257847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp967977 
End bp968996 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content44% 
IMG OID643560795 
ProductNMT1/THI5 like domain protein 
Protein accessionYP_002457377 
Protein GI219666942 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000000508636 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC GATGCATAGC AATTCTTATG AGCGTCTTTG TGGTTTTAGG ATTAGCGGGG 
TGTGGTGTTC AGAACAATAC GATCAACACT GGGAATGAAC AGCAAGGTGC ACAAGAAAAT 
AAGAAAGTCA CCTTTGTCCT GGACTGGACA CCGAATACTA ATCACACCGG CGTCTATGTG 
GCTAAAGAAT TAGGCTATTT CCAAGAATCA GGTTTAGAGG TGGATATTGT ACAGCCACCT 
GAAGGGGGAG CACTACCATT GGTAGCTGCC GGAAAAGCTG AATTTTGTGT AACCTTCCAG 
GAGGAACTTG CAGCTGCTCT TACCTCAGAC AGTCCCCTGG ATATGGTAGC CGTAGGGACT 
ATTTTGCAGC ATAATACTTC GGGAATTATC TCCTTGAAGG AAGATAACAT TACCAGACCG 
AAGGATATGG AGAACAAGGT CTATGCCACT TGGGATTCTC CTGTGGAAAA AGCCATTATT 
AAACAAGTCA TCGAGAAAGA CGGCGGTAAA TATGAGGCTA TCAGAATGAT TCCTAATACA 
GTAACAGATG TGATCTCGGC TTTGAAAACC GATGTGGACG CTATTTGGGT GTATTATGGA 
TGGGATGGCG TGGCAACAGA GGTGAAAGGC CTGGATACCA ATTATTTTGC GTTCAAAGAT 
ATTGACCCTG TCTTAGACTT TTATACCCCG GTCATAGCTG CCAGTCCTCT GTATTTGGAA 
AAAAACCAGG ACACAGCCAA ATCATTTTTA GCTGCTGTAG CCAAAGGGTA TGAATACGCT 
ATAGCACATC CCGAAGAAGC CGCTGAAATT CTGGTCAAAC ATGCCCCGGA ATTGGATCAG 
GAGCTTATAA AAGCCAGCCA AAAGTATTTG GCCAGGGAAT ATAAGGCTGA AGCAGAGCGG 
TGGGGATTCA TCGATCAGGC CCGTTGGGAT AATTTTTATG CTTGGATGGC AGATAATCAA 
TTGATCTCCA AAAGGATTGA ACCAGGACAA GGTTTTACCA ATGCCTACCT ACCGCAGTAA
 
Protein sequence
MKKRCIAILM SVFVVLGLAG CGVQNNTINT GNEQQGAQEN KKVTFVLDWT PNTNHTGVYV 
AKELGYFQES GLEVDIVQPP EGGALPLVAA GKAEFCVTFQ EELAAALTSD SPLDMVAVGT 
ILQHNTSGII SLKEDNITRP KDMENKVYAT WDSPVEKAII KQVIEKDGGK YEAIRMIPNT 
VTDVISALKT DVDAIWVYYG WDGVATEVKG LDTNYFAFKD IDPVLDFYTP VIAASPLYLE 
KNQDTAKSFL AAVAKGYEYA IAHPEEAAEI LVKHAPELDQ ELIKASQKYL AREYKAEAER 
WGFIDQARWD NFYAWMADNQ LISKRIEPGQ GFTNAYLPQ