| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0731 |
|---|
| Symbol | |
|---|
| ID | 7257698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 815633 |
|---|
| End bp | 817792 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643560647 |
|---|
| Product | peptidase M56 BlaR1 |
|---|
| Protein accession | YP_002457231 |
|---|
| Protein GI | 219666796 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAGG AACTATTCTT AAAGGTACTT AATATGAGTA TTACTGGAAG CGCTGTCATC
CTGTGTGTAG TGCTCATGCG GTTCCTGCTC AGAAGGGCAC CGAAGGTTTT TTCCTACGCC
CTTTGGAGCG TGGTGCTGTT TCGCCTGGTT TGCCCTTTTT CTTTCGAGAG TGCCTTAAGT
CTGCTGCCGG TGAACCCTGA ACCGATTCCG CACCGCATTG TTTATGCCGC CGTACCTCAG
ATTCAGACAG GGATCACTGC GGTGGATCGG GTCGTCAGCT CGTCCCTGCC CGGAGCGACG
CCTTATGCCA GCGTTAATCC TTTGCAGATC TGGGTCTTTT TGGGATCCTT GCTGTGGATA
ATGGGTATTG CCGTTCTTTT GCTCTACAGC GTTTTTTCAC TGCTGAGTTT AAAAAGGCGG
CTGAAGGACG CCGTCCATGA TAAGGAGAAC ATCTACCTCT GTGCCGGCCT GGATACCCCC
TTTGTCATGG GGGTGCTTCG TCCCCGGATT TACTTGCCTG CCTCCCTTTC CGGCGCAGAG
AAGGAGTATA TCCTGCTCCA TGAGCAGACC CATATCCGCC GGTTTGATCA TGTGGTCAAG
ATCCTGAGCT TTTTTGTGCT TTGCATCCAT TGGTTCAATC CCCTGGTGTG GGCGGCTTTT
TTCCTTTCCG GCAGAGATAT GGAAATGTCC TGCGACGAGG CAGTGATCAG GAAGCTGGGT
CATGAGGTGA AAAAGGACTA TTCCTCATCC CTCCTTTCCC TGGCCACGGG CAGACCTATT
GTGGGCGGCA CCCCCCTGGC TTTTGGTGAA GGAGATACCA GAGGGAGGAT TATGAATGTG
CTCAACTATA AAAAGCCTGG CTTCCGGGTC CTGCTGTTCG CTTTTTTGGC TGTGTTCATT
CTGGGTATGG GGATGATGGC CAATCCCAAA GCCGGGGAGA ACTTCACCGC TGCTGTCTAC
CGTGTGGATG AGATTCTCTA CAGTGCCCCT CAGTATTCTT TTGGTTACAC AAGGGACACC
GCCCCTGAGT ACAACATTTC TTCCGACTAC GTGCTGTTTC GCAGGGAGAT TTCCGATCAG
GACTGGGTCA TGCTGGGCAG TCTCTATGAA TACCCCCTCA GCCGTCAGGA GCAGTACGGA
CTCTTTGATC CGCTCAACAA CAAAGCCCAC GAAAATCTGG ACAAAGTGAA AACCATCTAC
CGGGCGGATC TTAAGGATGA AAACCAGACC CTTATCCTGG TGATGGAGCA AAAAAACGGC
CATGTCCTCT TGGCTCACGG TTATGATCAT CCCGGAAATC CCCGCGTCCG CTGGCTGTTT
CATTTGGATA AGGTGGTTGA GCCTGATGCC AATGGGCAGG CCGGCCAGGT GAAGCCCCAG
GATGATAGGG CTGCCGGCAC CACAGAGGCG GAGCCTATGG CGAAGGAGCA GGACCCTCTG
GAAAAGGCTG TCTCCGCTGC GATTCTCCAG CATAATAGGA GTGAGTATAC AGGAGGAGAT
TTTTCCGCTC AAGCCCACAC TACTTTGGCT ACTGAGACTG GGGAGTCGGT GACAGGCATC
GGCACGGTCA CGGTATATGC TATGGCCCTT TATATGGAGT TTGGATACCG TGGAGGTGGA
CTCTCTGAAA CGGGAGGCAG CCACATGCCG GTTGCCCTTA CTTTTGAAGT AGAAGACAAG
AATACCTACA GGCTGATGGA ATACTGGACG CCTCAGAACG GCGCCGGTTA TGGGCCTTCC
ATCCGTGAAA AGTTTCCGGA GAAGATCGCC GGAGGCGCTC TGGACACGCA AAAATATATC
CAGGCTCACG CCATGGCCTG TTATGAGCAG GCCATAGCCC ACGGCCAGGT GGATGTTGGC
GGCGAGATCG CCGGACTGAT CGAGACCATC TGTTCCTCCC CGGCTCATAT GTCCAATCCC
GGAGCCTATA TAGATGCTCA TCCCCTTGAG TACCGCACTC TGGTCTACTA TGGCAGCTAT
ACCCTGGAGT ATTGCTTTGA CCTCTTTGCC CAAGGCGGGC AGAGGGGACT GGAGGGTCAC
ATCATGGCCG CCGCCTGCCG GGATATTATG ATGGCCAAGG GTGCATCCTT TGACGATATG
CTCTACAACA CCGGCCAGGA TTGGTATGAC AGCATCAAGG ACTGGGCTGT TCCTTCATAA
|
|---|
| Protein sequence | MQEELFLKVL NMSITGSAVI LCVVLMRFLL RRAPKVFSYA LWSVVLFRLV CPFSFESALS
LLPVNPEPIP HRIVYAAVPQ IQTGITAVDR VVSSSLPGAT PYASVNPLQI WVFLGSLLWI
MGIAVLLLYS VFSLLSLKRR LKDAVHDKEN IYLCAGLDTP FVMGVLRPRI YLPASLSGAE
KEYILLHEQT HIRRFDHVVK ILSFFVLCIH WFNPLVWAAF FLSGRDMEMS CDEAVIRKLG
HEVKKDYSSS LLSLATGRPI VGGTPLAFGE GDTRGRIMNV LNYKKPGFRV LLFAFLAVFI
LGMGMMANPK AGENFTAAVY RVDEILYSAP QYSFGYTRDT APEYNISSDY VLFRREISDQ
DWVMLGSLYE YPLSRQEQYG LFDPLNNKAH ENLDKVKTIY RADLKDENQT LILVMEQKNG
HVLLAHGYDH PGNPRVRWLF HLDKVVEPDA NGQAGQVKPQ DDRAAGTTEA EPMAKEQDPL
EKAVSAAILQ HNRSEYTGGD FSAQAHTTLA TETGESVTGI GTVTVYAMAL YMEFGYRGGG
LSETGGSHMP VALTFEVEDK NTYRLMEYWT PQNGAGYGPS IREKFPEKIA GGALDTQKYI
QAHAMACYEQ AIAHGQVDVG GEIAGLIETI CSSPAHMSNP GAYIDAHPLE YRTLVYYGSY
TLEYCFDLFA QGGQRGLEGH IMAAACRDIM MAKGASFDDM LYNTGQDWYD SIKDWAVPS
|
|---|
| |