Gene Dhaf_0726 details

Gene Information

• Locus tag: Dhaf_0726
• Symbol: rplM
• ID: 7257693
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 812395
• End bp: 812826
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643560642
• Product: 50S ribosomal protein L13
• Protein accession: YP_002457226
• Protein GI: 219666791
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000000000000578919
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCACGT TCTTTGCGAA AGCGAATGCG GTGGAGCGTA AATGGTATGT CATTGACGCT 
GCAGGCCTTC CTTTGGGTCG TTTAGCTACT GAAGCTGCTC GCATCCTTAG AGGTAAACAT 
AAACCAACTT TTACTCCTAA TGTTGACACA GGAGATCATG TGATCATCAT TAATGCAGAA 
AAAGTTGTTT TGACCGGTAA TAAATTGGAT CAAAAAATGT ATCGCCGTCA CTCCGGCTAT 
CCTGGTGGTT TGAAAGAAAC CCCTTACAGA AAGCTGATGC AAAACATGCC TGAAAGAGCT 
GTTGAGCATG CCGTAAAAGG AATGCTTCCT CATAACAAGC TGGGTGCCCA GATGTATACG 
AAGCTGAAAG TATATCGTGA CGAAAATCAT CCGCATCAAG CGCAACAACC CGAAGTTTGG 
ACCATTCAAT AA 

 

Protein sequence

MSTFFAKANA VERKWYVIDA AGLPLGRLAT EAARILRGKH KPTFTPNVDT GDHVIIINAE 
KVVLTGNKLD QKMYRRHSGY PGGLKETPYR KLMQNMPERA VEHAVKGMLP HNKLGAQMYT 
KLKVYRDENH PHQAQQPEVW TIQ