| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0520 |
|---|
| Symbol | |
|---|
| ID | 7257487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 571889 |
|---|
| End bp | 573088 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643560439 |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_002457023 |
|---|
| Protein GI | 219666588 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCCTCA TCATTCGAGT CTATAAACTC CCTTTCCGGA CTTCCCAAGA CAATCTCAAT
CGTCTCTATG CCTGTAATCG CATTTCCGCC CAAATTTGGA ATCAGTGCCT CGACTTAGCA
AAAGAGCATG GACAAAGAAC CAACACTTGG CTAAGCCGCA AAGAGCTCCA CTTAGCTACA
AAAGGACGAT ATCCCATCCA CAGCCAATCC ATCCAGGCAG TCTATGAAAA ATATCTCGAT
GCCCGTGAAA ACGCCCTGCA AGCGAGAGCC TTAGGCTACA CCCAAATCCG CTACCCCTAT
AAAGAAAAGC ATCATTTCAA CACCCGTTGG AAAAAAGATG GCTTTCGTAT CGGTGAGAAG
GGCCGCATCG AATTAAGCCT GGGGCTTTGG GAGGGGAAGC GTCAGAAACC CATTACCGTC
CGTGTTGCTC ACTGTCCTCC CGGACAGATT AAAGAAATTG AGCTTGTCTA TGACCGAGGT
CTCAAATTAG CCATGGCCTT TGAAGACGGT ATTTCGCCCA AAGCGAATCC TGCTCAGGGC
ACAGCAGCCA TTGACTTAGG CGAAATACAC ACCCTCGCTT CAGTCACTGA CCAGGGACAA
GGTCTCCTCA TCACCGGGCG CAAACTTCGC AGCATCAAAC GGTTACGGAA TAAGAAGTTG
AAGGAACTGC AGCGAAAGAT GGCCCACTGT CAAAAAGGTT CCCGCCAGTG GAAAAAATAC
CGGCGGGCCT TCCATTATGT CCTTAGTAAG AGTGAGGCTC AACTCACCGA TGCCCTCCAT
AAAACCACCC GTGAATTCGT CCGTTGGTGC CTGGACAACG CCGTCAAGGA TGTAGTCATA
GGAGATGTAG AAGGAATCCA GCGTCACACG TCACCGAAGA AGAAACAGAC TCAGCGGAAG
CGTTCGCGAA GAATCAACCA GAACCTCTCC CAATGGACCT TTGGTAAAAC CCGGCGCTAT
TTACAGTATA AATTGGCTGC TGAAGGAATC AGCCTGAAGA AAGTGGATGA AGCCTACACT
ACACAAACGT GCCCCGTTTG TGGGAAGAGG CGTGTGCCCT CTTCCAGAAC ATATCACTGT
GGCTGTGGTT ATGTACAGCA TCGGGATCTG CATGGAGCGG GTAATATCTT AACCCAACAC
CTGTATGGCC ACTATCAAGC GATCGTCTTG AAAGACTACA AGTATCTACG GATCGCCTGA
|
|---|
| Protein sequence | MFLIIRVYKL PFRTSQDNLN RLYACNRISA QIWNQCLDLA KEHGQRTNTW LSRKELHLAT
KGRYPIHSQS IQAVYEKYLD ARENALQARA LGYTQIRYPY KEKHHFNTRW KKDGFRIGEK
GRIELSLGLW EGKRQKPITV RVAHCPPGQI KEIELVYDRG LKLAMAFEDG ISPKANPAQG
TAAIDLGEIH TLASVTDQGQ GLLITGRKLR SIKRLRNKKL KELQRKMAHC QKGSRQWKKY
RRAFHYVLSK SEAQLTDALH KTTREFVRWC LDNAVKDVVI GDVEGIQRHT SPKKKQTQRK
RSRRINQNLS QWTFGKTRRY LQYKLAAEGI SLKKVDEAYT TQTCPVCGKR RVPSSRTYHC
GCGYVQHRDL HGAGNILTQH LYGHYQAIVL KDYKYLRIA
|
|---|
| |