| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0473 |
|---|
| Symbol | |
|---|
| ID | 7257440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 511056 |
|---|
| End bp | 512417 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643560392 |
|---|
| Product | O-succinylbenzoate-CoA ligase |
|---|
| Protein accession | YP_002456976 |
|---|
| Protein GI | 219666541 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0829722 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGTCA ATTGGCTTAA AAAACAGGCT CTGGAAAAAC CCCATAAGCT GTTTTTAAAT
GAGCTGTCCT TTCAGGAGGT GGACCGGCGT GTCAGCGACC TGGCCGGCCG GATCTATCCC
TTTGTTAAAG CTGAAGACAG AGTTGCTCTT TATGCTCATA ATTCTGTGGA GATGGCCCTG
TTTTTCATGG CCCTGCAGGC TTTGCAAATG GAGGTGTTCA TGATGAATAC TCGCCTGACT
GGGGAGGAAA GAGCAAAAAA GCTAAAAACA TTAAACATCC GGGTGACTTT TTCCGACGAT
GATACCTTTA TTCCCTTTGG GAGGGTGCTG GCCGGTGACT ATGATGAACA GGCACGCTGC
CGGGAAGAGG AGGCCCCGGA GAAAATTGCG GTGATTATGG ATACCAGTGC CACCAGCGGT
GACTATAAGT CGGTGCCCCT GCGCCGGAAG CAGCTGGATG CTCATGTGCA GGCCTCCCGG
CAAGTTCTGG GGGTCAGGGA AGAAGATAAC TGGCTGCTCG TCCTTCCCAT GTACCATATC
GGCGGCTTAG CCATTTTAAT GCGCAGTTTG TATAATGGCA CCCGAGTCAC CTTGATGGGG
AAATTTGATG AAGAGCAGAT CTTAAAAGGG ATCGAAGAGG GCTCGCTGAC GATGCTCTCC
CTGGTTCCCA CCCTGTTGAT GAGGATTGTC AACCGCATCC GCCAACATCG TTTGCGGGTG
GTTTTGGTGA GTGGGGAATT CATTCCTAAG TCCTTGGTGG AAATTTGTCT GGCGAAAAGG
ATTCCCATCT ATAAATCCTA CGGCATGACA GAGACCACCA GCCAATGCAC GACCTTTTGT
GTGGCGGAAA ATCCTGCTAA GCTTGATGCG GTGGGCTTGC CCTTGCCGGG GGTCACCCTG
CGTATTGTTA ATCCGGATGC AGAGGGAATC GGGGAAGTAG CCATCCAAAG CCCCATGGTT
ATGGACGGGT ATCTGGGGAA AGAGGCGGTG GAGGGGTTCC TTAACACCCA GGATATGGGC
TATGTGGATG AGGAGGGATA TCTCTACATC CTGGATCGGC GCAAAGATAT GATTATCTCC
GGAGGGGAAA ACATCTATCC CCGGGAAATT GAGAATGTGC TGTATGCCCA TCCTGAGATA
TCTGAATGTG CCATGGTGGG GATGAAGGAT GAGAAGTGGG GACAGGTACC GGTTTTGTTT
GTGGTTTCTT CTTTGGGAGA TGAGGAGCTC AGGGATTATC TGGCCGGGAA GCTGGCCAGA
TATAAATTGC CCCGGAAAAT AGTGCATTTA CGGTCACTGC CGAAAAATGC CACGGGCAAA
ATACTGAAAA AGAATTTGGC AGAGCTGGCC CATGCGGATT GA
|
|---|
| Protein sequence | MVVNWLKKQA LEKPHKLFLN ELSFQEVDRR VSDLAGRIYP FVKAEDRVAL YAHNSVEMAL
FFMALQALQM EVFMMNTRLT GEERAKKLKT LNIRVTFSDD DTFIPFGRVL AGDYDEQARC
REEEAPEKIA VIMDTSATSG DYKSVPLRRK QLDAHVQASR QVLGVREEDN WLLVLPMYHI
GGLAILMRSL YNGTRVTLMG KFDEEQILKG IEEGSLTMLS LVPTLLMRIV NRIRQHRLRV
VLVSGEFIPK SLVEICLAKR IPIYKSYGMT ETTSQCTTFC VAENPAKLDA VGLPLPGVTL
RIVNPDAEGI GEVAIQSPMV MDGYLGKEAV EGFLNTQDMG YVDEEGYLYI LDRRKDMIIS
GGENIYPREI ENVLYAHPEI SECAMVGMKD EKWGQVPVLF VVSSLGDEEL RDYLAGKLAR
YKLPRKIVHL RSLPKNATGK ILKKNLAELA HAD
|
|---|
| |