| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0470 |
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| Symbol | |
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| ID | 7257437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 507606 |
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| End bp | 509258 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643560389 |
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| Product | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase |
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| Protein accession | YP_002456973 |
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| Protein GI | 219666538 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATT ATATTGCGGC CCTGGTTGAC GAATTATACC AGCTCGGTGT GCGTGAAGCG
GTCATCAGTC CCGGTTCCCG TTCCACTCCC CTCTCCGTGC TGTTTTGCGA ATACGGCTTT
CAGGTCTATG TCGGTATCGA TGAACGGTCG GCAGGGTTTT TCGCATTAGG CATAGCTAAG
GAAAAAGAGC GCCCCGTTGT GCTGGTATGT TCCTCCGGTT CGGCGGTGGC CCATTACTTC
CCGGCTATCG TCGAGGCAAA GCATTCCCAT GTCCCCTTAA TCGTTTTAAC GGCAGACCGG
CCCCCCGAGT TGCGTCAGGT GGGGGCTCCT CAAACCATCG ATCAAATCAA GTTTTATCAT
GATTACGCCA AGTACTTTGA AGAACTGGCT CTTCCTGAAG AAAGGGAAGG CATGTATCGG
TATGTGCGCG GGGTGATGCG CAAAGCCTAT GTAAGTTCTT TGGATCAGGG ATATGGGGTA
GCTCATATCA ATATCCCTTT GCGTGAACCC TTAAGCCCTG ATCTGGATGG GGTGGATTTC
ACGGCGGGCC GCTTGGACTA TCCTTTTGCC TGGAAAACAG GGGAGAAGGG GCTAACTATG
GATAGTTCGG TTTTCCAGGA TAAAAAGGGA ATCATTATCT GCGGCGGTGA TCCTTACGCG
GATTATCACA GGGAGGTTCT GGAGCTGGCA GAGCGCTTAA AGGCCCCCCT GCTGGCCGAT
CCTCTCGCCA ATTTTCGCAA TGATGACCAT CCCCTGATCA TGGATTGCTA TGACGCCTTT
CTGAAAAGTG ATGCGGTTAA GGTGGAATTA AAGCCTGAAT TTATCATTCA TTTTGGTCAG
ACTCCCGTTT CCAAACGGTT GCAGAATTTC ACGGCCATGC ATCAGGATGT TCTGTATTTT
CAGGTCAATG ACTACTTTCA ATACCGGGAT CCCTCCTTGT CGATCAGCCG GTATCTTGTG
GCCTCCCCCA AGGCTTTTGC CCGGTCTGTC AAGGTTCACA ATACCGATGA TGGCTACTCG
GGACGGTGGC AGCATTATCA AGCCCGCATG CGCCGGCGGC TCAATCTCGC TCAGGATGAG
GAGGAGCTGT TTGAAGGGAA GCTGGTGCAA AAGCTGCAGG ACAGTCTTCC CGAGGGGAGC
CGTCTCTTTG TTGCCAATAG TATGGCCATC CGCGATGTGG ATTACTTTCT GGAGGCACGT
CGACAACGGA TTAAAGTCTT AGGCAACCGG GGGGCCAATG GCATCGACGG CACGGTCTCC
ACTGCTTTGG GAGTTGCCAC CAGCGGCCAT CCTACGGTGC TGCTGACCGG GGACTTAGCC
TTCTTTCATG ATTTAAACGG CCTGCTGATC GGGAAAAACC ATGGACTGAA TTTAATTATC
GTCCTCCTCA ATAATAATGG GGGTGCTATT TTTAAGTATC TGCCCCAAAG TGAAAATAAG
TATTTTGAAT TGCTGTTTAT GACCCCTCAC GGTATGGATT TCAGCGGGCT TAAGACCCTC
TATGATCTGA CTTATTATGA ACCGGTTGAT TATGAAAGCT TTGCGCAGAA TTTTCAGGAA
GCCCTGACTT TAAGTGGGGT CAAGGTGCTG AATGTCAAAA TCGATGCCCG GCTGAGCAAA
GAGCTCCATG ATCGGTTGAC GAATCTTGAT TAA
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| Protein sequence | MTNYIAALVD ELYQLGVREA VISPGSRSTP LSVLFCEYGF QVYVGIDERS AGFFALGIAK
EKERPVVLVC SSGSAVAHYF PAIVEAKHSH VPLIVLTADR PPELRQVGAP QTIDQIKFYH
DYAKYFEELA LPEEREGMYR YVRGVMRKAY VSSLDQGYGV AHINIPLREP LSPDLDGVDF
TAGRLDYPFA WKTGEKGLTM DSSVFQDKKG IIICGGDPYA DYHREVLELA ERLKAPLLAD
PLANFRNDDH PLIMDCYDAF LKSDAVKVEL KPEFIIHFGQ TPVSKRLQNF TAMHQDVLYF
QVNDYFQYRD PSLSISRYLV ASPKAFARSV KVHNTDDGYS GRWQHYQARM RRRLNLAQDE
EELFEGKLVQ KLQDSLPEGS RLFVANSMAI RDVDYFLEAR RQRIKVLGNR GANGIDGTVS
TALGVATSGH PTVLLTGDLA FFHDLNGLLI GKNHGLNLII VLLNNNGGAI FKYLPQSENK
YFELLFMTPH GMDFSGLKTL YDLTYYEPVD YESFAQNFQE ALTLSGVKVL NVKIDARLSK
ELHDRLTNLD
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