Gene Dhaf_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0456 
Symbol 
ID7257423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp489790 
End bp490788 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content48% 
IMG OID643560375 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002456959 
Protein GI219666524 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTGG AAGTAAAAAA TTTAAAAACG GAATTTAAAC TGAAGCGCGG TACGGTGAGA 
GCCGTTGACG ACATCAGTTT TTCTGTAGAT AAAGGTGAAA TTCTGGCTAT TGTGGGGGAA 
TCGGGCTCCG GTAAAAGCGT GACCTCCCTG TCCATTATGG GGCTTTTACA GAACCCCGGC 
AAAATTGCCG GCGGCGATAT TCTGTTTGAT TCCCAAAACC TGACCCGGAT GAACAAGAAG 
GAGCTTCAGG ATATTCGGGG CAACAAAATC TCTATGATCT TTCAGGAACC CATGACTTCT 
TTGAATCCAG TCCAAAGGAT TAAGGATCAG ATTATGGAAA GCCTGATGAT CCATAAAAAG 
ATCAACAAAA AAGAGGCTCT GGCCAGAACC ATAGAGTTGC TGGACATGGT AGGTATACCT 
TCGGCGGCTC AACGGGCTGA TGATTATCCC CACCAAATGA GCGGGGGAAT GCGTCAGAGA 
GTCATGATCG CCATGGCCTT GTCCTGTGAG CCCCAGCTGT TGATCGCCGA CGAACCGACC 
ACAGCTCTTG ATGTCACTAT TCAGGCTCAG ATTCTCGATC TGCTTTATCA TATGCGGGAA 
AAATTTAATA TGGCGGTTTT GCTGATCACC CATGACCTGG GTGTTGTTTC AGAAGCGGCA 
GACCGGGTCA TCGTCATGTA TTGCGGAAAA ATCGTGGAAG AGGCTGATGT GAAGACTTTA 
TTTAAAAATC CTCTCCATCC CTATACGGTG GGGCTGCTCA ACTCCATCCC CCAGATCGAT 
GATGACAGCG ATGAACGTTT GTATATGATC AAGGGCATGG TGCCTAATCC CTTAAATATG 
CCGCCCGGAT GCTCTTTTTC TGATCGCTGT GACCGCTCCA TGGAGCGCTG CACCAGGGAA 
ACCCCGGAAC TTCTGGAGAT CGACGGGCAC AAAGTGCGCT GCTTTTTATA CGAAGAAGCT 
CAGGAAGAAG CTGAGGAAGG GGGATTGGCT GCCCAATGA
 
Protein sequence
MLLEVKNLKT EFKLKRGTVR AVDDISFSVD KGEILAIVGE SGSGKSVTSL SIMGLLQNPG 
KIAGGDILFD SQNLTRMNKK ELQDIRGNKI SMIFQEPMTS LNPVQRIKDQ IMESLMIHKK 
INKKEALART IELLDMVGIP SAAQRADDYP HQMSGGMRQR VMIAMALSCE PQLLIADEPT 
TALDVTIQAQ ILDLLYHMRE KFNMAVLLIT HDLGVVSEAA DRVIVMYCGK IVEEADVKTL 
FKNPLHPYTV GLLNSIPQID DDSDERLYMI KGMVPNPLNM PPGCSFSDRC DRSMERCTRE 
TPELLEIDGH KVRCFLYEEA QEEAEEGGLA AQ