| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0455 |
|---|
| Symbol | |
|---|
| ID | 7257422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 488847 |
|---|
| End bp | 489776 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643560374 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002456958 |
|---|
| Protein GI | 219666523 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACA CGAATGTTTC AAGCTCAGAT AACACTCTGC AGGCTGCTGA ATACGTGGAA
AAACCGGAGT CGCAGCTGAA GGAAATGTGG GATACACTCA AACAGAATAA GGCCGCAGTG
GTCGGCTTAT GTATCATCAT CATGCTGGTT CTTATTTCTC TCGTGGTCTG GGTGAGCAAC
CTCCTGGGCA TCCAGGTTTT GCCCTATGAC CCCAACTATT CCGATATGTC CAAAAGCTTT
ACTCATCCTA ATGCCGAGCA TTGGTTTGGC ACCGACCAGT TGGGCAGAGA CATGTTCAGC
AGAGTCATGG ATGGAACGAA GATTTCTCTC TTTGTCGGAA TTGCGGCAGT TTCCATCTCA
CTTACTGTCG GTGTTGTTCT GGGAGCCATC GCCGGCTATC GCGGCGGCCG AACAGATACG
ATCATCATGA GATTCATGGA TATGATCCTG GCCATCCCCT CCATCTTGTT GGCCATTGCT
TTCATGGCTG CTCTGGGCAA GGGCCTGGAT AAAGCGGTCA TAGCCATTGG CTTGGTGTCC
ATTCCGGAGT ATGCCCGCAT CGTCCGGGGC AGTATTCTCT CGATCAAAGA AAGTGACTAT
GTGCAGGCGG CCAAGGTGAT TGGCAACAGG GACAGCCGGA TCATCTTTAA ACATATCCTG
CCCAATATCG TATCCCTGAT CGTTGTGCGG GCCACCTTGG GAATTTCCAC AGCTGTGCTG
GATACCGCGG CTCTTGGCTT TTTAGGACTG GGTGTCCAAC CGCCCTTTGC TGAATGGGGA
GATATGTTAG GAAGGGCCAG AGGTTTCATT TTTACCGCAC CCTATACCTT GATTTTCCCG
GGCATTGCCA TCACGATTAC GGTTTTGGCC TTTAATTTAC TGGGTGACGG GCTTCGTGAT
GCTCTTGATC CAAAATCCAG AATAAAATAG
|
|---|
| Protein sequence | MKNTNVSSSD NTLQAAEYVE KPESQLKEMW DTLKQNKAAV VGLCIIIMLV LISLVVWVSN
LLGIQVLPYD PNYSDMSKSF THPNAEHWFG TDQLGRDMFS RVMDGTKISL FVGIAAVSIS
LTVGVVLGAI AGYRGGRTDT IIMRFMDMIL AIPSILLAIA FMAALGKGLD KAVIAIGLVS
IPEYARIVRG SILSIKESDY VQAAKVIGNR DSRIIFKHIL PNIVSLIVVR ATLGISTAVL
DTAALGFLGL GVQPPFAEWG DMLGRARGFI FTAPYTLIFP GIAITITVLA FNLLGDGLRD
ALDPKSRIK
|
|---|
| |