Gene Dhaf_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0450 
Symbol 
ID7257417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp483218 
End bp484165 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content48% 
IMG OID643560369 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_002456953 
Protein GI219666518 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000064789 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAAA TCGAGAAGCC CAAGATTGAA TGTGTCGAAC GTACAGACGA TAATTCCTAC 
GCTAAATTTG TCGTTGAGCC TCTCGAAAGA GGATATGGGA TTACCCTGGG TAATTCCCTG
AGAAGAATTC TTCTCTCCTC TCTTCCGGGG ACGGCAGTCA CATCCGTAAA GATCGAAGGG
GTGCTCCACG AGTTTTCTAC TGTACCAGGG GTTTTGGAAG ATGTTACAGA CATTATCCTC
AACCTGAAGA GCCTTGCATT AAAAGGACAT ACGGATGAAC CCAAAGTTCT CCGTCTGGAA
GCCGAAGGAG AAGGAGTCAT CAAGGCCGGC GACATCATCA CCGATGCCGA TATTGAGATA
CTCAATCCGG ACTTGAAGAT CGCGACTTTG GATAAGGATG GTCGTCTTTT CATGGAGATG
ACTGCCGAAA GAGGACGGGG CTATGTTTCG GCTGATAAGA ACAAAAAGCC AGACCAAGCC
ATCGGAATCA TTCCCATCGA CTCCATCTTC GCGCCCATCT ATAAGGTCAA TTATACCGTT
GAAGATACTC GTGTCGGAAT GGTCACAGAC TATGACAAGC TTACCCTTGA AGTCTGGTCC
AACGGCAGTA TCACACCGGA AGAAGCGACC AGCCTGGCTG CGAAAATTCT CAGTGAGCAC
TTGCGTCTCT TTATCGGCCT CACCGATAAG CTCAACAATG TTGAGATTAT GGTGGAGAAA
GAAGAAGAAG CGAAAGACAA AATCCTGGAG ATGACGATTG AAGATCTTGA CCTCTCAGTC
CGCTCTTACA ATTGTCTGAA ACGGGCCGGC ATTAACTCAG TAGAAGAACT GACCCAGAAG
ACGGAAGAGG ATATGATCAA GGTGCGCAAC CTGGGTCGTA AATCCTTGGA AGAAGTGGAG
TCTAAGTTAA AAGAGCTCGG CTTGGGGTTC CGCAAAGCCG ATGACTAA
 
Protein sequence
MLEIEKPKIE CVERTDDNSY AKFVVEPLER GYGITLGNSL RRILLSSLPG TAVTSVKIEG 
VLHEFSTVPG VLEDVTDIIL NLKSLALKGH TDEPKVLRLE AEGEGVIKAG DIITDADIEI
LNPDLKIATL DKDGRLFMEM TAERGRGYVS ADKNKKPDQA IGIIPIDSIF APIYKVNYTV
EDTRVGMVTD YDKLTLEVWS NGSITPEEAT SLAAKILSEH LRLFIGLTDK LNNVEIMVEK
EEEAKDKILE MTIEDLDLSV RSYNCLKRAG INSVEELTQK TEEDMIKVRN LGRKSLEEVE
SKLKELGLGF RKADD