Gene Dhaf_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0442 
SymbolsecY 
ID7257409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp478476 
End bp479765 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content49% 
IMG OID643560361 
Productpreprotein translocase subunit SecY 
Protein accessionYP_002456945 
Protein GI219666510 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0201] Preprotein translocase subunit SecY 
TIGRFAM ID[TIGR00967] preprotein translocase, SecY subunit 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTCG ATTCCCTGAA AAATGCCTGG AAATTGCCAG AGATCAGGAC AAAAATCGGA 
TTCACCTTAC TCATGTTCCT TATTTTCCGT ATTGGTGCTC ATATCCCGAT TCCCTTCATC
AACCATGACA TTTTGTCGAA TATCCTGGGA TCGGGAACTT TGTATGATTT CTTAGATACC
TTCTCCGGTG GATCCTTTAG GAGGTTCTCA GTCTTTGCGC TGAGTATCAC TCCTTATATT
ACGGCATCGA TTATTCTTCA GCTTTTGACC ATTGTCATCC CCTCCCTGGA GCGTCTTGCT
AAAGAAGGGG AATTCGGACG GAAGAAAATC ACCCAGTATA CCCGTTATGG AACCGTCATC
CTTGGTTTCA TCCAAGGTTT TGGTATGACC TTTGGATTGC GCGGTGCCCT CATCATTCCC
AAGCCGGGAA TGGAATGGGC TATCTATCTC TTAGTGGCTT TGATCCTAAC CGCCGGAACA
GCATTCCTGA TGTGGCTGGG AGAACGAATC ACTGAGAATG GGATCGGTAA CGGGATCTCG
CTGATCATCT TCGCCGGGAT CGTGGCCGGA GTACCGGATG CGATTAAACG CATCGCCGGA
CTCCTCAGCG TTGGAGAGAT CAATGTTTTC TCCGTATTTG GACTTATCGT GATTGGTCTG
GGGATCATTG CCGGAGTTGT CTTTATTCAG GAAGGTCAAC GCAGAATCCA GGTTCAGTAT
GCTAAGCGTG TGGTTGGACG CCGCGTTTAT GGAGGTCAAT CCTCCCATAT TCCTATGAAA
GTCAACCAAG CCGGGGTTAT TCCCATCATC TTTGCGATTA GCTTGCTCGC TTTCCCGAGC
ACTATCGCCA CCTGGATGGA CCCAACCTCC GCCTATGTAC GATTTGTTAA CACGTGGTTT
GTCATGAACG GCTCGCTGAC TTCGATCCCT TACCTGATCG TTTATGCGGT GCTGATCATC
TTCTTCACTT ACTTCTACAC AGCCGTCAGT TTTAATCCGG TGGATGTGGC AGATAACCTG
AAGAAGTACG GCGGGTTCAT TCCTGGACTT CGCCCGGGCC GTGCTACCTC TGACTATCTT
TCCAAAATTT TAAGCCGGCT TACTTTAGCC GGGGGAACCT TCCTCGCCAT GATTGCGGTT
CTTCCGAGTT TAGTCATCGG GCTGACTGGA ATTCCCAACA TCACTCTGGG CGGAACCTCA
CTCTTGATCG TAGTGAGCGT TGCGCTGGAA ACCATGAAAC AGTTGGAGTC CATGCTGATG
CAGCGGCACT ACCAAGGGTT CATGAAGTAA
 
Protein sequence
MIVDSLKNAW KLPEIRTKIG FTLLMFLIFR IGAHIPIPFI NHDILSNILG SGTLYDFLDT 
FSGGSFRRFS VFALSITPYI TASIILQLLT IVIPSLERLA KEGEFGRKKI TQYTRYGTVI
LGFIQGFGMT FGLRGALIIP KPGMEWAIYL LVALILTAGT AFLMWLGERI TENGIGNGIS
LIIFAGIVAG VPDAIKRIAG LLSVGEINVF SVFGLIVIGL GIIAGVVFIQ EGQRRIQVQY
AKRVVGRRVY GGQSSHIPMK VNQAGVIPII FAISLLAFPS TIATWMDPTS AYVRFVNTWF
VMNGSLTSIP YLIVYAVLII FFTYFYTAVS FNPVDVADNL KKYGGFIPGL RPGRATSDYL
SKILSRLTLA GGTFLAMIAV LPSLVIGLTG IPNITLGGTS LLIVVSVALE TMKQLESMLM
QRHYQGFMK