Gene Dhaf_0439 details

Gene Information

• Locus tag: Dhaf_0439
• Symbol: rpsE
• ID: 7257406
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 477318
• End bp: 477818
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 643560358
• Product: 30S ribosomal protein S5
• Protein accession: YP_002456942
• Protein GI: 219666507
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCGAAAA TCGATGCGAG TAAGCTAGAG TTGACTGAAA AAGTCGTTCA TATTGCCCGC 
GTGGCAAAAG TTGTCAAAGG GGGACGCCGT TTCAGCTTCA GCGCCCTGGT CGTCGTCGGA 
GACGGCCACG GCAACGTGGG AGCTGGACTT GGTAAAGCCG GAGAGGTACC TGAAGCCATT 
CGTAAAGGCA TGGAAGATGC TAAAAAGAAT ATGGTATCAG TACCCTTGAT CGGTACCACC 
ATTCCTCATG CTATCTTAGG TAACTACGGA GCAGGCTCCG TACTGCTCAA GCCTGCAGCA 
AAAGGTACCG GAGTTATTGC CGGTGGAGCG GTCCGTGCCG TTCTGGAAGT TGCCGGTGTA 
TCCGATATTC TCACCAAGTC TCTGGGATCA GCAAATCCTC ACAATATGGT GAACGCCACC 
ATGGCTGCCT TAAAATCTCT GAAGCGGGCG GAAGATGTTG CTAGACTCCG CGGTAAAACC 
GTAGAAGAAA TTCTGGGTTA G 

 

Protein sequence

MAKIDASKLE LTEKVVHIAR VAKVVKGGRR FSFSALVVVG DGHGNVGAGL GKAGEVPEAI 
RKGMEDAKKN MVSVPLIGTT IPHAILGNYG AGSVLLKPAA KGTGVIAGGA VRAVLEVAGV 
SDILTKSLGS ANPHNMVNAT MAALKSLKRA EDVARLRGKT VEEILG