Gene Dhaf_0437 details

Gene Information

• Locus tag: Dhaf_0437
• Symbol: rplF
• ID: 7257404
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 476318
• End bp: 476872
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 643560356
• Product: 50S ribosomal protein L6
• Protein accession: YP_002456940
• Protein GI: 219666505
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.140454
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAGAA TTGGCAAGCG GCCCATTAGT ATTCCTGGTG GCGTCGACGT CAACATAGAG 
GGCAATGTTG TGACCGTTAA AGGACCTAAG GGAACTTTGA CGAAAGAAAT GCATTCACTG 
ATCAACATTG CCGTGGAAGA ACAACAAATC GTCGTGACTC GTCCTGACGA TCAACCTCTC 
AGCCGCTCCT TGCATGGCTT AACCCGTACA CTGGTCGCCA ACATGGTTGA AGGTGTTACG 
AAGGGTTTCA GCAAGAGCCT GGATATGGTA GGGGTAGGAT ACCGTGCTGC GAAACAAGGC 
AACAAACTGG TTCTCTCAGT CGGTAAATCC CATCCTGTGG AATTGATTCC TTTCGAAGGA 
ATCGAAGTTG AAGTTCCTGC TCAGAACAAG ATCATTGTTA AAGGCATGGA CAAAGAACTG 
GTCGGCGATT TTGCCGCCGA GATCCGCAAG GAACGTCCAC CTGAGCCTTA CAAAGGCAAA 
GGAATCAAGT ATGAAAACGA AGTCGTCCGT CGTAAGGCCG GTAAGACCGG TGCTAAAAAA 
GGCGGTAAGA AGTAA 

 

Protein sequence

MSRIGKRPIS IPGGVDVNIE GNVVTVKGPK GTLTKEMHSL INIAVEEQQI VVTRPDDQPL 
SRSLHGLTRT LVANMVEGVT KGFSKSLDMV GVGYRAAKQG NKLVLSVGKS HPVELIPFEG 
IEVEVPAQNK IIVKGMDKEL VGDFAAEIRK ERPPEPYKGK GIKYENEVVR RKAGKTGAKK 
GGKK