| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0428 |
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| Symbol | rpsC |
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| ID | 7257395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 472758 |
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| End bp | 473417 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643560347 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_002456931 |
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| Protein GI | 219666496 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00750639 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGGTCAAA AAGTAAATCC TAAAGGCCTC AGGGTCGGAA TTATCCGTGA CTGGGAAGGC
CGTTGGTTTG CAGATAAAAA CTACCTGGAA CTCCTTCATG AAGATTTGAA GGTTCGCAAA
TTTGTGAAGA CCAAATTACA GCAAGCAGGT GTTCCTAAAG TTGAGATTGA ACGGGCAGCC
AACCGGGTTA AGGTTTCGAT TTATGCGGCT AAGCCGGGAA TCGTCATCGG CCGGGGCGGT
ACTGAAGTAG AAAATCTCCG CAAGCAACTG GAAGCCATGA CAGGCAAACA AGTGGCTGTC
AACATCGTGG AAGTTAAGAA GCCTGAGCTT GATGCACAAC TGGTTGCTGA GAGTGTCGCT
CAGCAATTAG AGAAGCGTGT GTCTTTCCGC CGGGCTATGA AACAAACCGT ACAGCGCACC
ATGCGTCAAG GCGGTCAGGG AATTAAGATT TCCTGCAGCG GCCGTTTAGG CGGTGCGGAA
ATCGCACGGA CCGAGTGGTA CAGTGAAGGG AAAGTTCCCC TCCATACTCT TCGTGCCGAC
ATTGATTATG GATTTGCTGA AGCAAATACC ACCTATGGAA AGATTGGCGT AAAAGTCTGG
ATATATAAAG GAGAGGTTCT TCCCGCCAAG AAGGTCGCTC AGGTGGAAGG AGGAAAATAA
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| Protein sequence | MGQKVNPKGL RVGIIRDWEG RWFADKNYLE LLHEDLKVRK FVKTKLQQAG VPKVEIERAA
NRVKVSIYAA KPGIVIGRGG TEVENLRKQL EAMTGKQVAV NIVEVKKPEL DAQLVAESVA
QQLEKRVSFR RAMKQTVQRT MRQGGQGIKI SCSGRLGGAE IARTEWYSEG KVPLHTLRAD
IDYGFAEANT TYGKIGVKVW IYKGEVLPAK KVAQVEGGK
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