Gene Dhaf_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0422 
SymbolrplC 
ID7257389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp469671 
End bp470300 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content52% 
IMG OID643560341 
Product50S ribosomal protein L3 
Protein accessionYP_002456925 
Protein GI219666490 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.95061e-14 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGAAAG GAATTTTGGG TAAAAAAGTG GGTATGACCC AGGTTTTCAC GGAAGAAGGA 
CATCTTATTC CCGTGACTGT GGTCGAAGCA GGTCCTTGCT ATGTCATCCA AAAGAAAACG
AAGGCAACGG ATGGTTACAA CGCAATCCAG GTTGGCTTTG GTGCTCTGAG GGAAAGACTG
GCGAACAAGC CGCAAAAAGG ACATGTTGCA AAAGCTTCTG TGAAGCCGAT GCGCTACATT
CGTGAGTTCC GCGTGGATGA TGTGGATGCT TACGAAATCG GACAAGAAAT CACGGCTGAA
GTGTTTGCTG CAGGTGATGC AGTGGACGTA GTCGGAATCT CCAAAGGTAA AGGCTTTGCC
GGGATGATTA AACGTCATGG TGCCGGCCGC GGACCCATGA AGCATGGTTC CAAGTATCAT
CGCCGTACCG GTTCCCTCGG CGCGAAAGGC CCGGCTCGTG TATTTAAGGG CCGCAACCTG
CCAGGGCGCA TGGGTGGCGA GCGGGTTACC GTTCAAAACC TGAAGGTTGT TCGGGTGGAT
GCGGATAAGA ATATGATTCT CGTCAAAGGC GCTGTACCCG GCGCGAAAAA GTCATTGCTC
ATTCTGAAGC CTTCCGTTAA GGCGAAGTAA
 
Protein sequence
MSKGILGKKV GMTQVFTEEG HLIPVTVVEA GPCYVIQKKT KATDGYNAIQ VGFGALRERL 
ANKPQKGHVA KASVKPMRYI REFRVDDVDA YEIGQEITAE VFAAGDAVDV VGISKGKGFA
GMIKRHGAGR GPMKHGSKYH RRTGSLGAKG PARVFKGRNL PGRMGGERVT VQNLKVVRVD
ADKNMILVKG AVPGAKKSLL ILKPSVKAK