| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0421 |
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| Symbol | rpsJ |
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| ID | 7257388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 469108 |
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| End bp | 469416 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643560340 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_002456924 |
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| Protein GI | 219666489 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000000238297 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAGTC AAAAAATTCG TATCCGCCTG AAAGCGTTTG ATCACAAAAC ATTGGATCAA
TCAGCAGAGA AAATTGTTGA AACAGCCAAG AGAACAGGTG CCCGTGTCAG TGGACCGATT
CCCCTTCCCA CTGAAAAAAG CATTTATACC ATTCTTCGTT CTCCCCACGT TAACAAGGAT
TCTCGCGAGC AATTCGAAAT GCGGACTCAT AAACGCCTGA TCGATATCCT GGAGCCAACC
TCCAAAACGG TGGATGCTCT GATGCGTTTA GATCTTCCCG CTGGCGTCGA TATCGAAATC
AAACTCTAA
|
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| Protein sequence | MSSQKIRIRL KAFDHKTLDQ SAEKIVETAK RTGARVSGPI PLPTEKSIYT ILRSPHVNKD
SREQFEMRTH KRLIDILEPT SKTVDALMRL DLPAGVDIEI KL
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