Gene Dhaf_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0420 
Symbol 
ID7257387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp467678 
End bp468880 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content51% 
IMG OID643560339 
Productelongation factor Tu 
Protein accessionYP_002456923 
Protein GI219666488 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000158382 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGC AAAAATTCGA ACGTACTAAA CCCCACGTTA ACGTTGGAAC CATCGGTCAC 
GTTGACCATG GTAAAACCAC CTCTACTGCT GCTATCACCT TAGTTCTTTC CAAAGCCGGC
GGCGCAGTAG CCCAAGCATT CGACCAAATC GACAAGGCTC CGGAAGAAAG AGAGCGTGGA
ATCACCATCT CCACTTCTCA CGTTGAGTAT GAAACCGCTA ACCGCCACTA TGCTCACGTT
GACTGCCCAG GCCACGCCGA CTATGTTAAA AACATGATCA CCGGTGCTGC CCAAATGGAT
GGAGCTATCC TGGTTGTATC CGCTGCTGAC GGCCCGATGC CCCAAACCCG TGAGCACATC
CTCCTTGCCC GTCAAGTAGG TGTTCCTTAC ATCGTGGTTT GGTTGAACAA AGCCGACATG
GTAGATGATC CGGAACTCAT GGAACTGGTT GAAATGGAAA TTCGTGAACT CCTCTCCGAG
TACGAATTCC CTGGCGATGA TATTCCCATC ATTCCCGGTT CCGGCCTGAA AGCTCTCCAA
TGCGGTTGCG GATCCCGTGA TTGTGAATGG TGCGGCAAGA TCTGGAATCT GATGGATGCT
GTTGACTCCT ATATTCCAAC TCCAGAGCGT GCTACCGACA AGCCTTTCCT TATGCCTGTG
GAGGACGTAT TCACCATTAC CGGTCGTGGT ACCGTTGCTA CCGGTCGTGT CGAGCGCGGT
GTGATTAAAG TCGGTGACGA GATTGAAATC GTTGGTTTGA CAGAAGCTCC TCGCAAAACC
GTTTGCACCG GCGTGGAAAT GTTCCGCAAG CTCCTTGACC AAGCTCAAGC AGGGGACAAC
ATCGGAGCTC TTCTCCGCGG TGTGGATCGT AAAGATATCG AACGCGGTCA AGTACTTGCT
AAAACCGGTT CTATTAAACC TCACACCAAA TTTACCGGCG AAGTTTTCGT ACTGAGCAAA
GAAGAAGGCG GACGTCATAC CCCATTCTTC AACAACTACC GCCCTCAGTT CTACTTCCGT
ACAACCGACG TTACCGGTGT TGTAACCCTT CCTGAAGGAA CGGAAATGGT TATGCCCGGA
GACCGTGTTA CCATCACTTG CGAAATTATC TCCCCTATCG CTATGGAAGA AGGACTTCGT
TTCGCTATCC GTGAAGGTGG CCGTACTGTT GGAGCCGGCG TTGTTGTCAG CATCATCGAA
TAG
 
Protein sequence
MAKQKFERTK PHVNVGTIGH VDHGKTTSTA AITLVLSKAG GAVAQAFDQI DKAPEERERG 
ITISTSHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI
LLARQVGVPY IVVWLNKADM VDDPELMELV EMEIRELLSE YEFPGDDIPI IPGSGLKALQ
CGCGSRDCEW CGKIWNLMDA VDSYIPTPER ATDKPFLMPV EDVFTITGRG TVATGRVERG
VIKVGDEIEI VGLTEAPRKT VCTGVEMFRK LLDQAQAGDN IGALLRGVDR KDIERGQVLA
KTGSIKPHTK FTGEVFVLSK EEGGRHTPFF NNYRPQFYFR TTDVTGVVTL PEGTEMVMPG
DRVTITCEII SPIAMEEGLR FAIREGGRTV GAGVVVSIIE