Gene Dhaf_0417 details

Gene Information

• Locus tag: Dhaf_0417
• Symbol: rpsL
• ID: 7257384
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 464462
• End bp: 464884
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 643560336
• Product: 30S ribosomal protein S12
• Protein accession: YP_002456920
• Protein GI: 219666485
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0048] Ribosomal protein S12
• TIGRFAM ID: [TIGR00981] ribosomal protein S12, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000000000000726978
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGACGA TTAATCAATT GATTCGCAAT GGCCGTTCGA AGATTGCAAA GAAATCAACA 
GCTCCAGCTA TGCAATGGGG CTATAACTCT TTACAACGCA AGCAATTCGC CTCTGGGGGA 
TCACCTCAAA AGCGTGGGGT TTGCACCAGG GTTTACACGA CAACTCCAAA GAAGCCGAAC 
TCTGCTCTCC GTAAAGTTGC CCGTGTGCGT TTAACCAATA CGATTGAAGT ATCATCATAC 
ATCCCAGGCA TCGGGCACAA CCTGCAGGAG CACAGTGTTG TTCTTGTCCG TGGCGGCCGT 
GTTAAAGACC TTCCGGGTGT TCGTTACCAC ATCGTTCGTG GGGCCCTTGA TACTCAAGGT 
GTTCAGAAAC GGATGCAAGC TCGTTCCAAA TACGGTGCCA AACGTCCTAA GAAAGGGAAG 
TAA 

 

Protein sequence

MPTINQLIRN GRSKIAKKST APAMQWGYNS LQRKQFASGG SPQKRGVCTR VYTTTPKKPN 
SALRKVARVR LTNTIEVSSY IPGIGHNLQE HSVVLVRGGR VKDLPGVRYH IVRGALDTQG 
VQKRMQARSK YGAKRPKKGK