Gene Dhaf_0406 details

Gene Information

• Locus tag: Dhaf_0406
• Symbol: rplK
• ID: 7257373
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 446429
• End bp: 446857
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643560325
• Product: 50S ribosomal protein L11
• Protein accession: YP_002456909
• Protein GI: 219666474
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0080] Ribosomal protein L11
• TIGRFAM ID: [TIGR01632] 50S ribosomal protein L11

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000000000122987
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGA AAGTCGTTGG TTTGGTTAAA TTAGCGATCA ACGCAGGTAA AGCAAATCCG 
GCACCTCCGG TTGGTCCAGC TCTTGGTCAG CACGGGGTCA ACATTATGGC CTTCTGCAAA 
GAATACAACG AGCGTACAAA GGATCAAGCG GGATTAATTA TTCCGGTTGA AATTACCGTT 
TATGAGGACC GTTCCTTTAC CTTTATTACC AAAACTCCGC CAGCATCTAT TTTGTTGAAG 
AAAGCTGCGA ACATTAATTC AGGTTCTTCA GAGCCTAACC GTAAAAAGGT GGCTCAGGTG 
AGCAAAACTA AAGTTCGTGA GATCGCTGAA ACCAAGATGA AAGACCTCAA TGCAGCAAGC 
GTTGAAGCGG CTATGAGTAT GGTTGAAGGT ACTGCGCGCA GTATGGGAAT CACCATCGTC 
GAAGGTTAA 

 

Protein sequence

MAKKVVGLVK LAINAGKANP APPVGPALGQ HGVNIMAFCK EYNERTKDQA GLIIPVEITV 
YEDRSFTFIT KTPPASILLK KAANINSGSS EPNRKKVAQV SKTKVREIAE TKMKDLNAAS 
VEAAMSMVEG TARSMGITIV EG