| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0400 |
|---|
| Symbol | thyX |
|---|
| ID | 7257365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 442434 |
|---|
| End bp | 443138 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643560317 |
|---|
| Product | FAD-dependent thymidylate synthase |
|---|
| Protein accession | YP_002456903 |
|---|
| Protein GI | 219666468 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1351] Predicted alternative thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000037909 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATGTTG AACTGATTCA ATACACACCG GATCCGGAAA AAGTCATTGC TGCCGCTGCT
CGTTTGTGCT ATTCGCCTGA TCCGGTTCCG GAGCTCATGG AAAAGTTGGA TGAGGAAAAG
GTAGCCAATC TTGTCCAGAA GCTTCGCGCC ATGGGTCATC TTTCGACCTT TGAACACATT
AGCTTTCAAT TCTCCATCGA TGGGGTATCC CGTGCGTTAT CCCATCAATT GGTTCGCCAT
CGGATCGCCA GCTATTCTCA ACGATCACAG CGGTATGTAA AAGAAGAGGG GTTTGACTTC
GTCACCCCCC CGACCATACG CCGTAATCCC CAAACCCAGG AACGCTTCGA GAATATTATG
GCCACTCTGC AGGAGGAATA CCAAGCTCTG TTGGCGATGG TTCCCGCAGA GGATGCCCGT
TATATCCTTC CCAATGCCTG CACCACCTCG TTGATGGCTA CCTTTAATGC CCGCTCTTTG
CTGAATTTCT TCGAACATCG AACCTGCATG CGCGCCCAGT GGGAAATTCG CATCCTGGCC
GAAAAAATGC TGGAGCTGGT CCGGGAAGTT GCCCCTAATG TTTTTGGTCA AGCCGGGCCT
ACCTGTGTCA CTCAAGGGGT TTGTCACGAA GGGGCCATGA GCTGCGGACG GATCAAGGCA
CTGAAGAAGG AAGCGGAAAG GATGACCCTA ATCTATGACC GATGA
|
|---|
| Protein sequence | MNVELIQYTP DPEKVIAAAA RLCYSPDPVP ELMEKLDEEK VANLVQKLRA MGHLSTFEHI
SFQFSIDGVS RALSHQLVRH RIASYSQRSQ RYVKEEGFDF VTPPTIRRNP QTQERFENIM
ATLQEEYQAL LAMVPAEDAR YILPNACTTS LMATFNARSL LNFFEHRTCM RAQWEIRILA
EKMLELVREV APNVFGQAGP TCVTQGVCHE GAMSCGRIKA LKKEAERMTL IYDR
|
|---|
| |