Gene Dhaf_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0389 
Symbol 
ID7257354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp429989 
End bp432469 
Gene Length2481 bp 
Protein Length826 aa 
Translation table11 
GC content54% 
IMG OID643560306 
ProductATPase AAA-2 domain protein 
Protein accessionYP_002456892 
Protein GI219666457 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0666957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAA AATATACGGA AAAGGCTCTC AAGGCGCTGC AATTCGCCTC AGACGAAGCT 
AAGCGCATGG GCTCCAATGT GATTGGCACC GAGCATCTGC TGCTTGGTTT AGTGGCTGAA
GGGGAAGGTA TCGCCGCCAA ATCCCTTCAT GGCATCGGGG TGACTCCGGA GAAAATCCGG
GAACAAATCG GCAACCTGAC TGGTATCGGC CAGCCTTTTA CCGGAGAGGT AAGCCTGACT
CCCCGGGTTA AACGGGTAAT GGAGCTGGCT CATGAAGAAG CCCGTCGTCA TGGGGTCAGC
TATATCGGTA CTGAGCATCT GCTCCTCGGT CTGCTGATGG AAGGAGAAGG TGTAGCGGCC
CGGGTGCTGC GCAATCTCGG TGTGAGCCCG GAAAGAATTT GGAAGCAAGT GGTTCAGCTT
TTAGGAGGTC AACCGGATGA TATTCCCATG CCCGGCGGTG CTCCCGGGCC CGGCACAGCC
AAGAATAACG GAGCTGCCAA TACGCCGGCT TTGAATGAAT TTGGCCGGGA TCTGACCCAG
CAAGCCCGGG AGGGCAGGCT GGACCCGGTA GTGGGACGGG AAGACGAGAT TGAGCGTGTA
GTTCAGGTCC TCAGCCGCCG CACCAAAAAT AATCCTGTGC TCATCGGCGA ACCGGGGGTA
GGGAAAACGG CCATTGCCGA GGGGCTGGCC CAACGGATCA TCAATAATAA AGTGCCCGAA
ACCCTGGCGG GCAAGCGGGT GGTTACCTTA GATCTCTCCG CTGTGGTGGC TGGAAGCAAG
TATCGCGGGG AATTTGAAGA GCGCCTGAAA AAGGTCATGG AAGAGATTCG GGTGGACGGC
CGCATTATCG TTTTCATCGA TGAGCTTCAC ACCTTAATCG GAGCCGGAGC GGCTGAAGGA
GCCATCGATG CGGCCAATAT CCTCAAACCG GCCTTAGCCC GGGGAGAGCT CCAATGCATC
GGCGCGACGA CCTTGGATGA ATATCGTAAA TATATTGAAA AAGATCCCGC TCTGGAGCGG
CGTTTCCAGC CTATTACGGT AGGAGAGCCT ACAGTAGAGC AGGCTGTTCA GATTCTCTTG
GGTTTACGGG ATCGTTATGA AGCCCATCAC CGGACCCAGA TTACCGATGA AGCGGTGGAA
GCAGCTGTGA AGATGTCCGA TCGCTATATC TCGGATCGCT TCCTTCCCGA TAAGGCCATT
GATTTAATGG ATGAGGCTGC TTCCCGTGTG CGCTTGGCAG CCTTTACAGC TCCCCCCGAT
CTTAAGTCTT TGGAAGAAAA GATCGAAGCC TTAAAGAGTG AGAAGGAAGC GGCTGTCTTA
GGTCAGGAGT TTGAAAAAGC GGCTAAATTC CGGGATGAGG AGCATCAGCT TCGGGAAGAG
CTTGCTCAGC TTCGCAACAC CTGGGAGAGT AAACGGGATA TAAGCCAAAG TCAGGTCACC
GCCGATGATA TCGCTCAGAT CGTGGCCAGT TGGACAGGAA TTCCGGTGAA GAAGCTGGCT
CAGGAAGAAA GCGAACGGCT CCTGGGCTTG GAAGAAACTC TCCATCAACG GGTGGTGGGG
CAAGAAGATG CTGTGAAGGC TGTTTCCCGC GCTGTGCGGC GGGCTCGTGC CGGATTGAAA
GATCCCAAAC GCCCGGTAGG TTCCTTCATC TTCCTCGGGC CCACCGGCGT GGGCAAGACC
GAACTGGCCC GGGCTTTGGC AGAAGCTTTA TTTGGTGAGG AAGACGCTCT GATTCGTATC
GATATGTCCG AATATATGGA GAAGCATGCG GTTTCCCGTC TGGTGGGAGC ACCTCCCGGA
TACATCGGTC ATGATGAAGG GGGCCAATTG ACCGAAGCCA TCCGCCGTAA ACCCTATAGT
GTTATCCTGC TGGATGAAAT CGAAAAAGCT CATCCTGAGG TCTTCAATAT CCTGCTGCAG
GTTCTGGAGG ATGGCCGTCT CACCGATACC AAGGGCAGGA CGGTGGATTT CCGTAATGCG
GTGATTATTA TGACCTCCAA TGTGGGCGCT TCCTTCATGA AGAAAGAAGC TTTGGGCTTT
GCCTCCCGCC GGGATGAGGA AACCGAGTAC AAGAATATGA GCTCACGGGT AATGGAGGAA
CTGAAAAAGA CCTTCCGTCC GGAGTTCCTC AACCGGGTGG ACGAAATTGT GGTCTTCCAT
TCCCTGCAAA CTGAGGGACT CTTGAAGATT ACCGAGATTT TGATGAAGCA GGTTAATGGC
CGTCTCCAGG AACAGGGCTA TGATCTGCAG GTGGAAAAGA GTGCTCTTGA GCTGATTGCC
AAAGAGGGCA ATGATCCTAC CTTCGGCGCC CGTCCTCTGC GCCGGGCTAT CCAACGCCTG
ATCGAAGACA GCTTGTCGGA AAAGATTCTC CTCGGAGAAT TTAAGTCCGG GGACAAAATC
AAAGTTGAGG CCGTAGAGGA CAAGATGAAA TTCGCCAAAG TCAGAGCCCG TAAAAGCAAA
AAGGCCGAAG CGGCGGAGTA G
 
Protein sequence
MNEKYTEKAL KALQFASDEA KRMGSNVIGT EHLLLGLVAE GEGIAAKSLH GIGVTPEKIR 
EQIGNLTGIG QPFTGEVSLT PRVKRVMELA HEEARRHGVS YIGTEHLLLG LLMEGEGVAA
RVLRNLGVSP ERIWKQVVQL LGGQPDDIPM PGGAPGPGTA KNNGAANTPA LNEFGRDLTQ
QAREGRLDPV VGREDEIERV VQVLSRRTKN NPVLIGEPGV GKTAIAEGLA QRIINNKVPE
TLAGKRVVTL DLSAVVAGSK YRGEFEERLK KVMEEIRVDG RIIVFIDELH TLIGAGAAEG
AIDAANILKP ALARGELQCI GATTLDEYRK YIEKDPALER RFQPITVGEP TVEQAVQILL
GLRDRYEAHH RTQITDEAVE AAVKMSDRYI SDRFLPDKAI DLMDEAASRV RLAAFTAPPD
LKSLEEKIEA LKSEKEAAVL GQEFEKAAKF RDEEHQLREE LAQLRNTWES KRDISQSQVT
ADDIAQIVAS WTGIPVKKLA QEESERLLGL EETLHQRVVG QEDAVKAVSR AVRRARAGLK
DPKRPVGSFI FLGPTGVGKT ELARALAEAL FGEEDALIRI DMSEYMEKHA VSRLVGAPPG
YIGHDEGGQL TEAIRRKPYS VILLDEIEKA HPEVFNILLQ VLEDGRLTDT KGRTVDFRNA
VIIMTSNVGA SFMKKEALGF ASRRDEETEY KNMSSRVMEE LKKTFRPEFL NRVDEIVVFH
SLQTEGLLKI TEILMKQVNG RLQEQGYDLQ VEKSALELIA KEGNDPTFGA RPLRRAIQRL
IEDSLSEKIL LGEFKSGDKI KVEAVEDKMK FAKVRARKSK KAEAAE