Gene Dhaf_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0351 
Symbol 
ID7257316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp386242 
End bp388611 
Gene Length2370 bp 
Protein Length789 aa 
Translation table11 
GC content51% 
IMG OID643560268 
Productanaerobic ribonucleoside triphosphate reductase 
Protein accessionYP_002456854 
Protein GI219666419 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase 
TIGRFAM ID[TIGR02487] anaerobic ribonucleoside-triphosphate reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.478958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTACTA AGATTCGCAA GCGCGACGGA CGGGAAGCTC CTTTTAACAT TGAAAAAATA 
GCCAACGCTA TCTTTAAGGC AGCCAGTGCC ACAGGAGGCA AGGACTATCA ATCCTCTCTC
CTTCTTGCGG AAGAAGTGGT CAACTACCTT GAGGTTAACC TACATAAAAA AGTCCCCTCT
GTGGAAGAAA TTCAGGATGC TGTGGAAAAG ATCCTGATCG AAAGAGGCCA CGCCCGCACA
GCCAAGGAAT TCATTCTCTA TCGGGCGGAA CGGACCCGTG TCCGGGAAAT GGATACCCGG
CTTATGAAGG TCTATGAGGA GCTGACTTTT AAAGAAGCCA AAGATAATGA TATGAAGCGG
GAAAATGCCA ACATTGACGG AGATACCGCC ATGGGCACCA TGCTGCGCTA CGGCTCCGAA
GGAGCTAAAC AGTTTAATGA GATGTTTGTC TTAAAGCCCG AACACTCCAA AGCCCACAAA
GAAGGAGATA TTCACATCCA TGATATGGAT TTTCTCACCC TCACCACTAC CTGCTGCCAG
ATCGATATTA TTAAACTTTT CAAAGAAGGC TTTGGGACCG GCCACGGCTT CTTAAGAGAA
CCCAATGATA TCCAGAGCTA CAGTGCTTTG GCTTGTATCG CTATTCAGTC CAACCAAAAC
GATCAACACG GCGGCCAAAG CATTCCTAAT TTTGATTACG GTATGGCGCC GGGAGTAGCC
AAAACCTATA TTAAGCTTTA TAGACAGAAC CTGCTTAAAG CCTGCGAGCT TTTAATCCAT
CAGGATGTGG ATCAGGAAGA GCTGGAAGCC CATCTCAAGG ATGTATTCTC AGCCCTTGCC
AACCAAGGGC ATACACCTAC CCTTTCCTCT GACCCGGATT ATTTTGAGCA GGAAGCCGCA
CTGCTTCAAA CCCTGCCTAA TCTTAAGCTG GACATGCCTA CCATCCGCAA AGCTCAGGAG
TTTGCCGTCA AAAAAGCTCT TGCCGAGACG GATAAAAAAA CCTATCAGGC TATGGAAGCT
TTGGTCCATA ACCTCAATAC CATGCACAGC CGTGCCGGAG CCCAAATTCC CTTCAGCTCC
CTCAATTACG GCACGGACAC CACCCCGGAA GGCCGTATGG TGGTCAAAAA CCTGCTCCTG
GCCACCGAAG CAGGTCTGGG CAACGGCGAA ACCCCCATCT TCCCTATCCA TATCTTCAAA
GTGAAAGAAG GGGTTAATTA TAATCCCAGT GATCCTAACT ACGATTTATT CCAGCTGGCT
TGCCGGGTCA GTGCCAAAAG ACTTTTCCCC AACTTCTCCT TTATTGATGC TCCCTTTAAC
CTGCAATACT ATGTCCCCGG CAGGCCTGAG ACGGAAATTG CCTACATGGG CTGCCGCACC
AGGGTGATCG GCAATATTTA CGACCCTTCC CGGGAAACCA TCTTTGGACG GGGAAATCTC
AGCTTCACCA CCATTAACCT CCCCCGTCTT GCCATCAAAA GCCACCAAAG CCGCACCGAA
TTCTTCGCCA TGCTGGATGA GAAAATCGAC CTGGTTATCA ATCAGCTCCT GGAACGTTTT
GAAATTCAAG CCCGTAAAAA AGTCAAGAAC TTCCCCTTCC TGATGGGACA GGGAATCTGG
CTGGATTCCG ACCAACTGGG CTGGGATGAT GAAATTCGCG AAGTGCTGAA GCACGGCACC
CTTTCCATGG GCTTTATCGG ACTGGCTGAA TGCCTTATGG TCTTAACCGG GCAGCATCAC
GGGGAATCGG AAGAGGCACG GGAGCTGGGA CTGGAGATTG TTCAGCAACT GCGCCGGCGC
ATGGATGAAG CAGGACGGGA ATACGGGCTG AATTTCTCTC TCTTGGCCAC TCCTGCCGAG
GGCCTCTCCG GCCGCTTCAT CAAAATGGAC CGGGAGCTTT TCGGCAGCAT CCCCGGTATC
ACAGACAAAG AATACTACAC CAACAGCTTC CATATCCCCG TCAGCTTCCC GATCAGCGCC
TTTCACAAAA TCACGATTGA AGCCCCCTAC CATGAGCTGA CCAACGCCGG CCATATCACT
TATGTGGAGG TTGATGGCGA TCCCACTCAA AACTTGGAGG CTTTTGAGAA AATTGTCCGT
TGCATGAAAG AATCCGGCAT CGGCTTCGGT GCTGTCAATC ATCCTGTGGA TCGGGATCCC
GTCTGCGGAT ATACAGGAAT CATCGGCAAC GAATGCCCCC GCTGCGGCCG CGAAGAAAGC
ACTGCTCCCT TTGAGCGCAT CCGCCGTATC ACCGGCTATC TGGTGGGAAC CTTGGATCGC
TTTAACGACG CCAAAAAAGC CGAAGTCCGG GATCGGATTA AACACCTGAA TTGCCTTGAC
TCCTCCATCG GTGAGAAAGG GACGCTTTAA
 
Protein sequence
MITKIRKRDG REAPFNIEKI ANAIFKAASA TGGKDYQSSL LLAEEVVNYL EVNLHKKVPS 
VEEIQDAVEK ILIERGHART AKEFILYRAE RTRVREMDTR LMKVYEELTF KEAKDNDMKR
ENANIDGDTA MGTMLRYGSE GAKQFNEMFV LKPEHSKAHK EGDIHIHDMD FLTLTTTCCQ
IDIIKLFKEG FGTGHGFLRE PNDIQSYSAL ACIAIQSNQN DQHGGQSIPN FDYGMAPGVA
KTYIKLYRQN LLKACELLIH QDVDQEELEA HLKDVFSALA NQGHTPTLSS DPDYFEQEAA
LLQTLPNLKL DMPTIRKAQE FAVKKALAET DKKTYQAMEA LVHNLNTMHS RAGAQIPFSS
LNYGTDTTPE GRMVVKNLLL ATEAGLGNGE TPIFPIHIFK VKEGVNYNPS DPNYDLFQLA
CRVSAKRLFP NFSFIDAPFN LQYYVPGRPE TEIAYMGCRT RVIGNIYDPS RETIFGRGNL
SFTTINLPRL AIKSHQSRTE FFAMLDEKID LVINQLLERF EIQARKKVKN FPFLMGQGIW
LDSDQLGWDD EIREVLKHGT LSMGFIGLAE CLMVLTGQHH GESEEARELG LEIVQQLRRR
MDEAGREYGL NFSLLATPAE GLSGRFIKMD RELFGSIPGI TDKEYYTNSF HIPVSFPISA
FHKITIEAPY HELTNAGHIT YVEVDGDPTQ NLEAFEKIVR CMKESGIGFG AVNHPVDRDP
VCGYTGIIGN ECPRCGREES TAPFERIRRI TGYLVGTLDR FNDAKKAEVR DRIKHLNCLD
SSIGEKGTL