| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0290 |
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| Symbol | |
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| ID | 7257255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 322142 |
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| End bp | 324487 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643560208 |
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| Product | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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| Protein accession | YP_002456794 |
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| Protein GI | 219666359 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00528785 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAT CAAGAAGAAG TTTCTTAAAG TGGTCTGCCA CCCTGGGGGC CATGGGAACA
GGACTTATGT CATTAACCGC CTGTAGTCAG AACGCTTCCT TAACCGGCAG CGAAGCAGCT
TCTGCAGGAG AACAAATCAT CCCCACCGCC AGCACCCAGG ACTGCGGGGG GCGTTGCCTG
ATCAAAGCTC ATGTGAAAGA CGGCGTAATC ACGAGGATCA GTACCCGGGG CGCTTATGAA
GAGGATGAAC CCGGTGCGAA TATGAAAGCC TGCCTGAGGG GACGGAGCTA TCGCAAACAT
CTCTATCACC CTGATCGCTT GAAGTACCCC ATGAAACGGG TGGGCAAACG GGGAGAAGGA
AAATTCGAAC AGATCTCCTG GGAAGAAGCC ATTGATACCA TTGCCAAAGA AACCCGGCGC
ATCTTTGATC AATATGGACC TGAATCAAGA TACTGCAACG TAGGCACTGG GGATACCGGC
GGCGTAATTT ACCGTATGGG CCTTGGCGGC CGTTTCCTAA GCGCCACCGG CGGTCATCTC
CCGTTGTACA ATTCGGTTAG TATGGGGAAT ACGGGCACTG CTACTCCTTA TGTCTATGGG
GTCGCCGCTA CCGCCAGCAG TCTGGACAGC TTAAAAGACA CCAAGCTGGT TATTCTTTGG
GGACACAATA CCACCGAGAC TATTTTCGGC GCCTCCAATT ATTATTTCCG TCAAATGAAG
AACCGCGGCT GTAAATTTAT CTGCGTCGAT CCCCGCAACT CCAATACGGC TGTGGCTTTT
GCCGACGAAT GGATTCCCTT GCTGCCTACC ACGGATAATG CCCTGATGGA TGCCATGGCT
TATGTGATCG TCAGCGAGAA TCTGCACGAT CAAGCTTTTC TGGATCAATA CGTCCAGGGC
TTTGATGAGG AGCATATGCC CGAAGGAGTA CCCGCCCATG AATCCTTAGT ATCCTATCTC
TTCGGTAAAA AGGATGGGGT GGAGAAAACC CCGGAATGGG CAGAGGCTAT CTGCAAAGTT
CCTGCCGAAA CCATTCGCCG TATTGCCCGG GAATACGCCA CCACGAAACC GGCGGCCCTT
ATCCAGGGCT GGGGCCCCCA ACGGCATTCC TGCGGAGAGA GAACAGCCCT CGGCGCTACC
ATGCTGGCTT CCATTACCGG CAATGTAGGC GTTCTTGGGG GCTGGGCCGG CGGCTATATC
GGTCTGAGCC GCAAAGGTTG CGTTGGACTT CCTGACGTAC CGAATCCTTA TCCCGGAGCT
ATTCCAACCT TATCCTGGGT CGATGCCATT GAATGCCCCG AAAAAGTCAC CCCGGCAGAA
GGATTGCTGG GTGTAGACAA ACTGAACAGC CCGATCAAAA TGCTCTTGAA CTTGGCCGGA
GATTTCATAG CCAATCAAAA TCCTGATATC AACCGCACGA TCAGAGTTTT AGAAGATGAG
AGCCTCGTGG AATTCATCGT GGTCAGCGAC CTGTTCATGA CTCCCAGTGC CCGCTATGCG
GACATTCTCC TGCCCGGCAA CACCTTCTTT GAGCGTTATA ATATCGGCGC AACCTGGAAT
AATGGGGATT ACTTCATCCT CTCCCAAAAG ATTGTGGATA ATTATTATGA AAGCCGTTCC
GAATATGATT GGTTGGCTGA AGTAGCGGAT AAGCTGGGAG CAAAGGATGT CTTCACCGGC
GGCAAGACTG AGGAAGAATG GGTGCGCTGG ATTGTCGACG AGACCCGGGC CAAGTATCCG
GAGACCCTTT CCTGGGAGGA GCTGGAGAAA GTAGGCATCA GCAAATTCCA TTATGACGGT
CCCCGGGTAG CTTTCCAGGA TCAGATCGAA GATCCGGTCA ACAATCCTTT CCCCACCCCA
TCCGGCAAAA TAGAGCTCTT CTCCAAGACC CTTTACGATA TGCATAACCC CGAAATTCCT
GCTATACCTG TTTACGTACC GGCCTGGGAA GGACCGGAAG ATGAGTTAAC CGAAAAATAT
CCCCTGCAGC TGATTGGCTG GAAAACGAAA GCAAGAGACA ACTCCACCTT CTATAATAAT
CCCTGGCTAC AGCAAGCCAT GGTCCAGGAA GTATGGATCA ACCCCATGGA TGCCAAACCC
AGAAACATTG TTACCGGCGA CCGGGTCAAA GTATTTAACG ATCGTGGCAC GACCATGCTC
CAAGCCCGGG TTACATCAAG GGTTATTCCC GGAGTTATCG CCGCCCCCAC AGGATCCTGG
TTTACTCCCG ATGGCAAAGG CGGTTGCACT AACGGCAACC TTAACGTCCT GACTACCTTA
AGAAAAACTG CTCTTTCTCA TGGCAATACT CAACATACCA GCCTGGTGGA AATAAGCAAA
TTATAA
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| Protein sequence | MNLSRRSFLK WSATLGAMGT GLMSLTACSQ NASLTGSEAA SAGEQIIPTA STQDCGGRCL
IKAHVKDGVI TRISTRGAYE EDEPGANMKA CLRGRSYRKH LYHPDRLKYP MKRVGKRGEG
KFEQISWEEA IDTIAKETRR IFDQYGPESR YCNVGTGDTG GVIYRMGLGG RFLSATGGHL
PLYNSVSMGN TGTATPYVYG VAATASSLDS LKDTKLVILW GHNTTETIFG ASNYYFRQMK
NRGCKFICVD PRNSNTAVAF ADEWIPLLPT TDNALMDAMA YVIVSENLHD QAFLDQYVQG
FDEEHMPEGV PAHESLVSYL FGKKDGVEKT PEWAEAICKV PAETIRRIAR EYATTKPAAL
IQGWGPQRHS CGERTALGAT MLASITGNVG VLGGWAGGYI GLSRKGCVGL PDVPNPYPGA
IPTLSWVDAI ECPEKVTPAE GLLGVDKLNS PIKMLLNLAG DFIANQNPDI NRTIRVLEDE
SLVEFIVVSD LFMTPSARYA DILLPGNTFF ERYNIGATWN NGDYFILSQK IVDNYYESRS
EYDWLAEVAD KLGAKDVFTG GKTEEEWVRW IVDETRAKYP ETLSWEELEK VGISKFHYDG
PRVAFQDQIE DPVNNPFPTP SGKIELFSKT LYDMHNPEIP AIPVYVPAWE GPEDELTEKY
PLQLIGWKTK ARDNSTFYNN PWLQQAMVQE VWINPMDAKP RNIVTGDRVK VFNDRGTTML
QARVTSRVIP GVIAAPTGSW FTPDGKGGCT NGNLNVLTTL RKTALSHGNT QHTSLVEISK
L
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