Gene Dhaf_0286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0286 
Symbol 
ID7257251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp318166 
End bp319914 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content44% 
IMG OID643560204 
Producthistidine kinase 
Protein accessionYP_002456790 
Protein GI219666355 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000344798 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTTCA ATGAGAGTTT TTTCTTATTA GTGTTTTATA GCGCAAGCTT TAATGTTAAG 
ATAGACAGGG GTGTTTTATT GAAAGTCAAA AAACTAAAAT ATCAGCTCAT TATTCCTACG
GTGATCATTG TGTTTATTTT GATGAGCATC AACATAGTGC TGGTATTTCA AATTCAACAA
AAGCAAGCGG TTAACGAACT GAAGGAAAAG GGTCTGGCCC TGACCCAACA ATTGGATTCT
ACTTGGGAAT TTTTATCCAT CAATCAACAC AGGATCAATA CCAGTGCCAA AGGCGACTTT
GATTTTAAAG GACTCAACTG CTCTACGGCA GGAATGAGTA TCGGCGTCAT TTTTGCTGAA
AAAAACGGCT ATAAGATCCG GTATGTGAAT ACAAATCCCC GTAATCCTTT GAATGAACCT
GATCCTTTTG AAAAAAGGGT ATTAGAAAAG TTTGCGAATG ATACCGCAAT AGATTCCTAT
TGGGAATTGG TCAAGGAAGA GGGACAGCGC TATTTCTGCT ATGTCACCCC CATGCGCATT
GATGAAACCT GTCTGGAATG CCATGGTGAA CCGGCGGGAG AAATGGATAT TTCCGGTTAT
GCTAAAGAGG GCATGAAGAT CGGTGACTTA GCCGGTGCGA TCAGCATTAC CATGCCCACA
ACCATTCAGG ATCAGGCCCT TGTTTTTAAC ATGTTTTGGC AATGCATGAC CTTTACTTTA
CTGATCATCG GTTGTGTTTT AGCCATTTAC TATTTTGTGA CCAAACGGGT AACCAAGCCT
ATAGAGCATC TGGAAACTGC GGTAAAGCAG GTTGGCGAAG GAGATTTGAA CGTTGATCTG
CAAAACTTCA GGGCGGCGGA GGAAATCGAA GGCTTAGCAG ACCATTTTAA CAACATGGCC
AAACAATTGA AAGAGCTGTA TTCTGATTTA GAACATAAAG TGGAGCTGCG GACCTCTGAG
CTGGGGAAAG CTAATGAACA GCTGCAAATC AAGCAAATAC AGCTGGAAAA GGTCAACACC
CTCTTAAAAG AAGACAGTCA GTATAAAGCC GATTTCTTGG CGATGGTCAG CCATGAGTTA
AGAACGCCCT TGACGGCTAT CATCATCTTT GCGGAGATCC TCCTGAAAAA GAAACGGTTT
GAAGATTCCT CGGAAGAACA AATCCTTTGT GAAATCAAAG AGAACAGCGA AGTATTGCTC
CACATGATCA ATAACATCCT GGATCTGGCA CGCCTGGAAA CCGGCAGGAA TTCTCTGTCC
ATAGAGACGG TGGATTTAGT GGATGTCATT AATAATGTGG AATGCGTGAT TCGGCCTTTA
GCCCAGCGCA ATGATATTCA CCTGACAGCC AGAGTCGAAC GGGGCGTACC CCTCATTCAA
GGAGATTATG AGAAGGTGCG CAGGATCATC GAGAATTTAG CGGGGAATGC CATTAAATTT
ACGCCTTTGG GCGGCAAAGT GAATATTCAG GCCTCTTTGG CAGAGGATCC GCACTATGTT
AAGATCACGG TTCAGGATGA CGGGATAGGG ATCTCCAAAG AAAATCAAGC TCATATCTTT
GAAAAGTTTA TTCAGGTGGA TTCATCCTCC TCAAGGCAAT ATAACGGCAG CGGATTGGGA
TTAGCCTTGG CTAAAGAACT TACCGAGCTC CATGGCGGGG TTATTTCCGT AGAAAGCGAT
TTGAATAAGG GCAGCACTTT CATAGTGCTG CTGCCCATTG AAAGACCACA AAGGGGAGAT
GCAGAATGA
 
Protein sequence
MFFNESFFLL VFYSASFNVK IDRGVLLKVK KLKYQLIIPT VIIVFILMSI NIVLVFQIQQ 
KQAVNELKEK GLALTQQLDS TWEFLSINQH RINTSAKGDF DFKGLNCSTA GMSIGVIFAE
KNGYKIRYVN TNPRNPLNEP DPFEKRVLEK FANDTAIDSY WELVKEEGQR YFCYVTPMRI
DETCLECHGE PAGEMDISGY AKEGMKIGDL AGAISITMPT TIQDQALVFN MFWQCMTFTL
LIIGCVLAIY YFVTKRVTKP IEHLETAVKQ VGEGDLNVDL QNFRAAEEIE GLADHFNNMA
KQLKELYSDL EHKVELRTSE LGKANEQLQI KQIQLEKVNT LLKEDSQYKA DFLAMVSHEL
RTPLTAIIIF AEILLKKKRF EDSSEEQILC EIKENSEVLL HMINNILDLA RLETGRNSLS
IETVDLVDVI NNVECVIRPL AQRNDIHLTA RVERGVPLIQ GDYEKVRRII ENLAGNAIKF
TPLGGKVNIQ ASLAEDPHYV KITVQDDGIG ISKENQAHIF EKFIQVDSSS SRQYNGSGLG
LALAKELTEL HGGVISVESD LNKGSTFIVL LPIERPQRGD AE